[med-svn] [Git][med-team/mecat2][master] 5 commits: routine-update: Packaging update

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / mecat2


Commits:
4e4bf3b0 by Andreas Tille at 2023-11-07T08:27:16+01:00
routine-update: Packaging update

- - - - -
f76f701a by Andreas Tille at 2023-11-07T08:27:16+01:00
routine-update: Standards-Version: 4.6.2

- - - - -
4a6e3ca8 by Andreas Tille at 2023-11-07T08:27:32+01:00
Set upstream metadata fields: Repository-Browse.

Changes-By: lintian-brush

- - - - -
bf07de86 by Andreas Tille at 2023-11-07T08:43:17+01:00
Add patch to fix FTBFS with gcc-13

- - - - -
6af0d444 by Andreas Tille at 2023-11-07T08:56:07+01:00
routine-update: Ready to upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/control
- + debian/patches/fix-gcc13-ftbfs.patch
- debian/patches/series
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+mecat2 (0.0+git20200428.f54c542+ds-4) unstable; urgency=medium
+
+  * Team upload.
+  * Add patch to fix FTBFS with gcc-13
+    Closes: #1054708
+  * Standards-Version: 4.6.2 (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Tue, 07 Nov 2023 08:44:12 +0100
+
 mecat2 (0.0+git20200428.f54c542+ds-3) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -6,7 +6,7 @@ Priority: optional
 Build-Depends: debhelper-compat (= 13),
                zlib1g-dev,
                perl
-Standards-Version: 4.5.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/mecat2
 Vcs-Git: https://salsa.debian.org/med-team/mecat2.git
 Homepage: https://github.com/xiaochuanle/MECAT2


=====================================
debian/patches/fix-gcc13-ftbfs.patch
=====================================
@@ -0,0 +1,15 @@
+Description: Fix FTBFS with gcc-13
+Bug-Debian: https://bugs.debian.org/1054708
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Tue, 07 Nov 2023 08:36:13 +0100
+
+--- a/src/app/fsa/simple_align.hpp
++++ b/src/app/fsa/simple_align.hpp
+@@ -3,6 +3,7 @@
+ 
+ #include <array>
+ #include <string>
++#include <cstdint>
+ #include <unordered_map>
+ #include <vector>
+ 


=====================================
debian/patches/series
=====================================
@@ -1 +1,2 @@
 modify_makefiles.patch
+fix-gcc13-ftbfs.patch


=====================================
debian/upstream/metadata
=====================================
@@ -10,3 +10,4 @@ Reference:
   Pages: 1078
   DOI: 10.1038/nmeth.4432
   URL: https://doi.org/10.1038/nmeth.4432
+Repository-Browse: https://github.com/xiaochuanle/MECAT2



View it on GitLab: https://salsa.debian.org/med-team/mecat2/-/compare/393ceb540260f278d73a26b982877582887ba22f...6af0d444b93c36769cf12c3f58e2c0c13044fec1

-- 
View it on GitLab: https://salsa.debian.org/med-team/mecat2/-/compare/393ceb540260f278d73a26b982877582887ba22f...6af0d444b93c36769cf12c3f58e2c0c13044fec1
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