[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Nov 12 01:43:35 GMT 2023



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
f2873ceb by Andreas Tille at 2023-11-12T01:43:27+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,11 +1,11 @@
-Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
+Last-Update: Sun, 12 Nov 2023 01:42:05 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
  dicomscope                    |     25 | {imaging}                                  | 
  amide                         |     24 | {imaging}                                  | 
- oscar                         |     14 | {tools,data,practice}                      | 
- gnumed-server                 |     12 | {covid-19,practice}                        | 
+ oscar                         |     14 | {practice,data,tools}                      | 
+ gnumed-server                 |     12 | {practice,covid-19}                        | 
  orthanc-postgresql            |     10 | {imaging}                                  | 
  orthanc-mysql                 |      9 | {imaging}                                  | 
  pixelmed                      |      8 | {imaging}                                  | 
@@ -17,7 +17,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  jebl2                         |      5 | {bio-dev}                                  | 
  mia                           |      5 | {imaging}                                  | 
  icb-utils                     |      4 | {bio-dev}                                  | 
- king                          |      4 | {imaging,typesetting}                      | 
+ king                          |      4 | {typesetting,imaging}                      | 
  staden                        |      4 | {bio}                                      | 
  treeview                      |      4 | {bio-phylogeny,bio}                        | 
  blimps                        |      3 | {bio}                                      | 
@@ -29,27 +29,27 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  ghmm                          |      2 | {bio}                                      | 
  libdivsufsort                 |      2 | {bio-dev}                                  | 
  librg-utils-perl              |      2 | {bio}                                      | 
- melting                       |      2 | {bio,cloud}                                | 
- phyutility                    |      2 | {cloud,bio}                                | 
+ melting                       |      2 | {cloud,bio}                                | 
+ phyutility                    |      2 | {bio,cloud}                                | 
  piler                         |      2 | {bio}                                      | 
  proalign                      |      2 | {bio-phylogeny,bio}                        | 
  pymia                         |      2 | {imaging-dev}                              | 
  seq-gen                       |      2 | {bio}                                      | 
- sibsim4                       |      2 | {bio,cloud}                                | 
+ sibsim4                       |      2 | {cloud,bio}                                | 
  spread-phy                    |      2 | {bio-phylogeny,bio}                        | 
- thesias                       |      2 | {covid-19,bio}                             | 
- vienna-rna                    |      2 | {bio,covid-19}                             | 
- anfo                          |      1 | {cloud,bio}                                | 
+ thesias                       |      2 | {bio,covid-19}                             | 
+ vienna-rna                    |      2 | {covid-19,bio}                             | 
+ anfo                          |      1 | {bio,cloud}                                | 
  arden                         |      1 | {bio,cloud}                                | 
  assemblytics                  |      1 | {bio}                                      | 
- beast-mcmc                    |      1 | {bio-phylogeny,bio}                        | 
+ beast-mcmc                    |      1 | {bio,bio-phylogeny}                        | 
  biojava6-live                 |      1 | {bio-dev}                                  | 
  bitseq                        |      1 | {bio}                                      | 
  clonalorigin                  |      1 | {bio}                                      | 
  cmtk                          |      1 | {imaging}                                  | 
- cufflinks                     |      1 | {cloud,bio}                                | 
+ cufflinks                     |      1 | {bio,cloud}                                | 
  cutesv                        |      1 | {bio}                                      | 
- dextractor                    |      1 | {bio,covid-19}                             | 
+ dextractor                    |      1 | {covid-19,bio}                             | 
  fastml                        |      1 | {bio}                                      | 
  hinge                         |      1 | {bio}                                      | 
  libbio-mage-utils-perl        |      1 | {bio-dev}                                  | 
@@ -64,15 +64,15 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  microbegps                    |      1 | {bio}                                      | 
  opencfu                       |      1 | {laboratory}                               | 
  papyrus                       |      1 | {imaging-dev}                              | 
- pigx-rnaseq                   |      1 | {covid-19,bio}                             | 
+ pigx-rnaseq                   |      1 | {bio,covid-19}                             | 
  plasmidid                     |      1 | {bio,covid-19}                             | 
- pplacer                       |      1 | {bio-phylogeny,covid-19,bio}               | 
+ pplacer                       |      1 | {bio,bio-phylogeny,covid-19}               | 
  pscan-chip                    |      1 | {bio}                                      | 
  python-seqcluster             |      1 | {bio}                                      | 
  rambo-k                       |      1 | {bio}                                      | 
  rdp-alignment                 |      1 | {bio}                                      | 
  rdp-classifier                |      1 | {bio}                                      | 
- rtax                          |      1 | {cloud,bio}                                | 
+ rtax                          |      1 | {bio,cloud}                                | 
  saint                         |      1 | {bio}                                      | 
  sga                           |      1 | {bio}                                      | 
  skesa                         |      1 | {bio}                                      | 
@@ -82,10 +82,10 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  sprai                         |      1 | {bio}                                      | 
  suitename                     |      1 | {bio}                                      | 
  surankco                      |      1 | {bio}                                      | 
- tophat-recondition            |      1 | {bio,covid-19}                             | 
+ tophat-recondition            |      1 | {covid-19,bio}                             | 
  tracetuner                    |      1 | {bio}                                      | 
  varscan                       |      1 | {covid-19,bio}                             | 
- acedb                         |      0 | {cloud,bio}                                | 
+ acedb                         |      0 | {bio,cloud}                                | 
  bambamc                       |      0 | {bio-dev}                                  | 
  biosyntax                     |      0 | {bio}                                      | 
  brig                          |      0 | {bio}                                      | 
@@ -98,13 +98,13 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  ctn                           |      0 | {imaging-dev}                              | 
  eegdev                        |      0 | {imaging-dev}                              | 
  elastix                       |      0 | {imaging}                                  | 
- embassy-domainatrix           |      0 | {bio,cloud}                                | 
- embassy-domalign              |      0 | {bio,cloud}                                | 
+ embassy-domainatrix           |      0 | {cloud,bio}                                | 
+ embassy-domalign              |      0 | {cloud,bio}                                | 
  embassy-domsearch             |      0 | {bio,cloud}                                | 
  emboss-explorer               |      0 | {bio}                                      | 
  fis-gtm                       |      0 | {his}                                      | 
  gatk-bwamem                   |      0 | {bio-dev}                                  | 
- htscodecs                     |      0 | {bio-dev,covid-19}                         | 
+ htscodecs                     |      0 | {covid-19,bio-dev}                         | 
  insighttoolkit5               |      0 | {imaging-dev}                              | 
  ipig                          |      0 | {bio}                                      | 
  jmodeltest                    |      0 | {bio-phylogeny,bio}                        | 
@@ -137,9 +137,9 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  metaphlan                     |      0 | {bio}                                      | 
  metastudent-data              |      0 | {bio}                                      | 
  metastudent-data-2            |      0 | {bio}                                      | 
- mhap                          |      0 | {bio-ngs,bio}                              | 
+ mhap                          |      0 | {bio,bio-ngs}                              | 
  mia                           |      0 | {imaging-dev}                              | 
- milib                         |      0 | {covid-19,bio-dev}                         | 
+ milib                         |      0 | {bio-dev,covid-19}                         | 
  ncbi-igblast                  |      0 | {bio}                                      | 
  ncbi-vdb                      |      0 | {bio-dev}                                  | 
  orthanc-imagej                |      0 | {imaging}                                  | 
@@ -150,7 +150,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  plasmidseeker                 |      0 | {bio}                                      | 
  provean                       |      0 | {bio}                                      | 
  python-cgelib                 |      0 | {bio-dev}                                  | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                         | 
+ python-seqcluster             |      0 | {bio-dev,covid-19}                         | 
  qcumber                       |      0 | {bio}                                      | 
  resfinder-db                  |      0 | {bio}                                      | 
  runcircos-gui                 |      0 | {bio}                                      | 
@@ -164,7 +164,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:04 +0000
  srf                           |      0 | {bio-dev}                                  | 
  surpyvor                      |      0 | {bio}                                      | 
  terraphast                    |      0 | {bio}                                      | 
- tipp                          |      0 | {covid-19,bio}                             | 
+ tipp                          |      0 | {bio,covid-19}                             | 
  trace2dbest                   |      0 | {bio}                                      | 
  xdffileio                     |      0 | {imaging-dev}                              | 
  xpore                         |      0 | {bio}                                      | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
+Last-Update: Sun, 12 Nov 2023 01:42:06 +0000
 
        Source                              | Vote   |             Tasks                                                   |                                Tags                                
 -------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------------------
@@ -17,7 +17,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  scalapack                                 |     36 | {nanoscale-physics-dev}                                             | 
  ntl                                       |     35 | {mathematics-dev}                                                   | 
  arduino-mk                                |     32 | {robotics}                                                          | 
- fftw                                      |     32 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
+ fftw                                      |     32 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
  flintqs                                   |     32 | {mathematics}                                                       | 
  libmatio                                  |     28 | {mathematics-dev}                                                   | 
  ppl                                       |     27 | {numericalcomputation}                                              | 
@@ -33,8 +33,8 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  flann                                     |     15 | {mathematics-dev,engineering-dev}                                   | 
  gts                                       |     15 | {viewing-dev}                                                       | 
  mbpoll                                    |     15 | {simulations}                                                       | 
- rubiks                                    |     15 | {mathematics,geometry}                                              | 
- fftw                                      |     13 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
+ rubiks                                    |     15 | {geometry,mathematics}                                              | 
+ fftw                                      |     13 | {physics-dev,meteorology-dev,mathematics-dev}                       | 
  setzer                                    |     13 | {typesetting}                                                       | 
  cliquer                                   |     12 | {mathematics-dev}                                                   | 
  geg                                       |     12 | {viewing}                                                           | 
@@ -49,8 +49,8 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  gf2x                                      |     10 | {mathematics-dev}                                                   | 
  lrcalc                                    |     10 | {mathematics-dev}                                                   | 
  ratpoints                                 |     10 | {mathematics-dev}                                                   | 
- coinor-symphony                           |      9 | {logic,mathematics,numericalcomputation}                            | 
- libitpp                                   |      9 | {mathematics-dev,engineering-dev}                                   | 
+ coinor-symphony                           |      9 | {logic,numericalcomputation,mathematics}                            | 
+ libitpp                                   |      9 | {engineering-dev,mathematics-dev}                                   | 
  lxi-tools                                 |      9 | {engineering,dataacquisition}                                       | 
  pcl                                       |      9 | {robotics-dev}                                                      | 
  teem                                      |      9 | {imageanalysis}                                                     | 
@@ -65,23 +65,23 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  libxsmm                                   |      6 | {mathematics-dev}                                                   | 
  mathgl                                    |      6 | {viewing}                                                           | 
  muparser                                  |      6 | {mathematics-dev}                                                   | 
- persalys                                  |      6 | {statistics,engineering,mathematics}                                | 
+ persalys                                  |      6 | {statistics,mathematics,engineering}                                | 
  uctodata                                  |      6 | {linguistics}                                                       | 
  apophenia                                 |      5 | {statistics}                                                        | 
- debian-science                            |      5 | {physics,mathematics,economics,nanoscale-physics,machine-learning}  | 
+ debian-science                            |      5 | {physics,economics,nanoscale-physics,machine-learning,mathematics}  | 
  dune-localfunctions                       |      5 | {mathematics-dev}                                                   | 
- getdp                                     |      5 | {mathematics,engineering,simulations}                               | 
+ getdp                                     |      5 | {engineering,mathematics,simulations}                               | 
  polylib                                   |      5 | {mathematics}                                                       | 
  apertium-streamparser                     |      4 | {linguistics}                                                       | 
  auto-07p                                  |      4 | {mathematics}                                                       | 
  coinmp                                    |      4 | {numericalcomputation,logic,mathematics-dev}                        | 
- debian-science                            |      4 | {economics,nanoscale-physics,machine-learning,physics}              | 
- debian-science                            |      4 | {statistics,physics,nanoscale-physics,economics}                    | 
+ debian-science                            |      4 | {physics,machine-learning,economics,nanoscale-physics}              | 
+ debian-science                            |      4 | {statistics,nanoscale-physics,physics,economics}                    | 
  dxsamples                                 |      4 | {nanoscale-physics}                                                 | 
  etsf-io                                   |      4 | {nanoscale-physics,physics}                                         | 
  hpcc                                      |      4 | {numericalcomputation,distributedcomputing}                         | 
  ipe-tools                                 |      4 | {typesetting}                                                       | 
- jeuclid                                   |      4 | {viewing,typesetting}                                               | 
+ jeuclid                                   |      4 | {typesetting,viewing}                                               | 
  libcgns                                   |      4 | {engineering}                                                       | 
  libcgns                                   |      4 | {engineering-dev}                                                   | 
  libmatheval                               |      4 | {mathematics}                                                       | 
@@ -89,10 +89,10 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  opencascade                               |      4 | {simulations}                                                       | 
  openigtlink                               |      4 | {robotics-dev}                                                      | 
  openstereogram                            |      4 | {tools}                                                             | 
- persalys                                  |      4 | {statistics,engineering,mathematics}                                | 
+ persalys                                  |      4 | {mathematics,statistics,engineering}                                | 
  psurface                                  |      4 | {numericalcomputation}                                              | 
  python-escript                            |      4 | {engineering,numericalcomputation,simulations}                      | 
- toulbar2                                  |      4 | {physics,logic,mathematics,numericalcomputation}                    | 
+ toulbar2                                  |      4 | {logic,physics,numericalcomputation,mathematics}                    | 
  ucto                                      |      4 | {linguistics}                                                       | 
  apache-opennlp                            |      3 | {linguistics}                                                       | 
  coda                                      |      3 | {meteorology}                                                       | 
@@ -104,7 +104,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  libccp4                                   |      3 | {nanoscale-physics-dev}                                             | 
  libmatheval                               |      3 | {mathematics-dev}                                                   | 
  mbtserver                                 |      3 | {linguistics}                                                       | 
- metis-edf                                 |      3 | {engineering,numericalcomputation}                                  | 
+ metis-edf                                 |      3 | {numericalcomputation,engineering}                                  | 
  mpi4py-fft                                |      3 | {mathematics-dev}                                                   | 
  newmat                                    |      3 | {mathematics-dev}                                                   | 
  ompl                                      |      3 | {robotics-dev}                                                      | 
@@ -153,18 +153,18 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  debian-science                            |      1 | {psychophysics}                                                     | 
  debian-science                            |      1 | {tools}                                                             | 
  gemmlowp                                  |      1 | {mathematics-dev}                                                   | 
- hepmc3                                    |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ hepmc3                                    |      1 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  itsol                                     |      1 | {mathematics-dev}                                                   | 
  jhdf                                      |      1 | {engineering}                                                       | 
  libdogleg                                 |      1 | {mathematics-dev}                                                   | 
- libgtkdatabox                             |      1 | {engineering-dev,viewing-dev}                                       | 
- libvigraimpex                             |      1 | {machine-learning,imageanalysis-dev}                                | 
+ libgtkdatabox                             |      1 | {viewing-dev,engineering-dev}                                       | 
+ libvigraimpex                             |      1 | {imageanalysis-dev,machine-learning}                                | 
  looptools                                 |      1 | {highenergy-physics-dev}                                            | 
  looptools                                 |      1 | {highenergy-physics}                                                | 
  meshsdfilter                              |      1 | {mathematics-dev}                                                   | 
  mrmpi                                     |      1 | {tools}                                                             | 
  ncrystal                                  |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
- neartree                                  |      1 | {numericalcomputation,mathematics-dev}                              | 
+ neartree                                  |      1 | {mathematics-dev,numericalcomputation}                              | 
  openmesh                                  |      1 | {mathematics-dev}                                                   | 
  openmx                                    |      1 | {nanoscale-physics,physics}                                         | 
  ortools                                   |      1 | {mathematics-dev}                                                   | 
@@ -173,10 +173,10 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  sac2mseed                                 |      1 | {geography}                                                         | 
  schroedinger-coordgenlibs                 |      1 | {chemistry,nanoscale-physics-dev}                                   | 
  sparskit                                  |      1 | {mathematics-dev}                                                   | 
- spfft                                     |      1 | {meteorology-dev,nanoscale-physics-dev,physics-dev,mathematics-dev} | 
+ spfft                                     |      1 | {mathematics-dev,physics-dev,nanoscale-physics-dev,meteorology-dev} | 
  ssm                                       |      1 | {nanoscale-physics-dev}                                             | 
  ssm                                       |      1 | {nanoscale-physics}                                                 | 
- trilinos                                  |      1 | {engineering-dev,physics-dev,mathematics-dev}                       | 
+ trilinos                                  |      1 | {physics-dev,mathematics-dev,engineering-dev}                       | 
  tulip                                     |      1 | {viewing-dev}                                                       | 
  vdt                                       |      1 | {mathematics-dev}                                                   | 
  veccore                                   |      1 | {mathematics-dev}                                                   | 
@@ -188,8 +188,8 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  apertium-swe-dan                          |      0 | {linguistics}                                                       | 
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
- calculix-ccx-doc                          |      0 | {engineering,numericalcomputation,simulations}                      | 
- calculix-ccx-test                         |      0 | {numericalcomputation,engineering,simulations}                      | 
+ calculix-ccx-doc                          |      0 | {simulations,numericalcomputation,engineering}                      | 
+ calculix-ccx-test                         |      0 | {simulations,numericalcomputation,engineering}                      | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
  coda                                      |      0 | {meteorology-dev}                                                   | 
  code-saturne                              |      0 | {engineering}                                                       | 
@@ -239,7 +239,7 @@ Last-Update: Sat, 11 Nov 2023 13:42:06 +0000
  sagemath-database-graphs                  |      0 | {mathematics}                                                       | 
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
  sardana                                   |      0 | {dataacquisition}                                                   | 
- schroedinger-maeparser                    |      0 | {nanoscale-physics-dev,chemistry}                                   | 
+ schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
  slicot                                    |      0 | {engineering-dev,robotics-dev}                                      | 
  spaghetti                                 |      0 | {geography}                                                         | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 11 Nov 2023 13:42:07 +0000
+Last-Update: Sun, 12 Nov 2023 01:42:06 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f2873ceb46d5a99b90ba7a8ffc5080dd1a9af894

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f2873ceb46d5a99b90ba7a8ffc5080dd1a9af894
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