[med-svn] [Git][med-team/snakemake][main] Depend on python3-yte.

[Rebecca N. Palmer (@rnpalmer-guest)]

Rebecca N. Palmer pushed to branch main at Debian Med / snakemake


Commits:
41b753fb by Rebecca N. Palmer at 2023-11-26T14:08:17+00:00
Depend on python3-yte.

- - - - -


4 changed files:

- debian/README.source
- debian/changelog
- debian/control
- debian/rules


Changes:

=====================================
debian/README.source
=====================================
@@ -14,7 +14,6 @@ Missing (optional) dependencies:
 
 - setup.py-declared:
 slacker
-yte
 retry (ITP #961109)
 crc32c, oauth2client, google-api-python-client, google-cloud-storage (google.cloud)
 peppy, eido


=====================================
debian/changelog
=====================================
@@ -3,7 +3,7 @@ snakemake (7.32.4-1) UNRELEASED; urgency=medium
   * New upstream release.  Update d/copyright and patches.
   * Skip newly added tests that we can't run.
   * Clean up after docs build.  (Closes: #1045316)
-  * Not uploaded because it uses python3-yte in several places.
+  * Depend on python3-yte.
 
  -- Rebecca N. Palmer <rebecca_palmer at zoho.com>  Mon, 12 Jun 2023 07:38:54 +0100
 


=====================================
debian/control
=====================================
@@ -52,7 +52,7 @@ Build-Depends: ca-certificates,
                python3-toposort <!nocheck>,
                python3-wrapt,
                python3-yaml,
-#               python3-yte (>= 1.5.1~) <!nocheck>,
+               python3-yte <!nocheck>,
                r-cran-rmarkdown,
                stress <!nocheck>
 Standards-Version: 4.6.2
@@ -81,7 +81,7 @@ Depends: ${misc:Depends},
          python3-toposort,
          python3-wrapt,
          python3-yaml,
-#         python3-yte (>= 1.5.1~),
+         python3-yte,
          libjs-bootstrap,
          libjs-jquery,
 Recommends: cwltool,


=====================================
debian/rules
=====================================
@@ -24,9 +24,6 @@ export PYBUILD_TEST_ARGS=python{version} -m pytest -o faulthandler_timeout=60 -v
 # python3-tibanna: test_tibanna (possibly also specific to one cloud provider?)
 # python3-tes: test_tes
 
-# These need python3-yte, but there's enough of them that we should maybe package that instead of skipping them: test_template_engine,test_config,test_config_ref,test_dataframe,test_subworkflows,test_update_config,test_config_merging,test_yaml_config,test_profile,test_validate,test_validate_fail,test_modules_all,test_modules_all_exclude_2,test_module_worfklow_namespacing,test_github_issue1500,test_config_yte
-#  and not test_template_engine and not test_config and not test_config_ref and not test_dataframe and not test_subworkflows and not test_update_config and not test_config_merging and not test_yaml_config and not test_profile and not test_validate and not test_validate_fail and not test_modules_all and not test_modules_all_exclude_2 and not test_module_worfklow_namespacing and not test_github_issue1500 and not test_config_yte
-
 # Skipped due to network use
 # skipped in build, but run in autopkgtest: test_ancient
 # skipped in both as it uses FTP and some autopkgtest environments are http-only: test_github_issue1062



View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/41b753fb55d5576ae58167fe376889f82653dd36

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/41b753fb55d5576ae58167fe376889f82653dd36
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