[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Oct 1 02:43:49 BST 2023



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
c4fecb79 by Andreas Tille at 2023-10-01T01:43:32+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,9 +1,9 @@
-Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
+Last-Update: Sun, 01 Oct 2023 01:42:05 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- orthanc                       |    110 | {practice,covid-19,imaging}                         | 
- orthanc-wsi                   |     51 | {laboratory,oncology,covid-19,imaging,practice,his} | 
+ orthanc                       |    110 | {practice,imaging,covid-19}                         | 
+ orthanc-wsi                   |     51 | {laboratory,practice,his,covid-19,oncology,imaging} | 
  dicomscope                    |     26 | {imaging}                                           | 
  amide                         |     25 | {imaging}                                           | 
  orthanc-webviewer             |     21 | {imaging}                                           | 
@@ -11,12 +11,12 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  pixelmed                      |     12 | {imaging}                                           | 
  orthanc-dicomweb              |     11 | {imaging,covid-19}                                  | 
  orthanc-postgresql            |     11 | {imaging}                                           | 
- oscar                         |     11 | {tools,data,practice}                               | 
+ oscar                         |     11 | {data,practice,tools}                               | 
  gnumed-server                 |     10 | {covid-19,practice}                                 | 
  orthanc-mysql                 |     10 | {imaging}                                           | 
  mrtrix3                       |      9 | {imaging}                                           | 
  mia                           |      8 | {imaging}                                           | 
- king                          |      7 | {imaging,typesetting}                               | 
+ king                          |      7 | {typesetting,imaging}                               | 
  orthanc-gdcm                  |      7 | {imaging}                                           | 
  bart-view                     |      5 | {imaging}                                           | 
  libminc                       |      5 | {imaging-dev}                                       | 
@@ -41,20 +41,20 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  pymia                         |      2 | {imaging-dev}                                       | 
  seq-gen                       |      2 | {bio}                                               | 
  sibsim4                       |      2 | {bio,cloud}                                         | 
- spread-phy                    |      2 | {bio-phylogeny,bio}                                 | 
- thesias                       |      2 | {covid-19,bio}                                      | 
+ spread-phy                    |      2 | {bio,bio-phylogeny}                                 | 
+ thesias                       |      2 | {bio,covid-19}                                      | 
  tracetuner                    |      2 | {bio}                                               | 
- treeview                      |      2 | {bio-phylogeny,bio}                                 | 
+ treeview                      |      2 | {bio,bio-phylogeny}                                 | 
  anfo                          |      1 | {cloud,bio}                                         | 
  arden                         |      1 | {cloud,bio}                                         | 
  assemblytics                  |      1 | {bio}                                               | 
- beast-mcmc                    |      1 | {bio-phylogeny,bio}                                 | 
+ beast-mcmc                    |      1 | {bio,bio-phylogeny}                                 | 
  bitseq                        |      1 | {bio}                                               | 
  blimps                        |      1 | {bio}                                               | 
  brig                          |      1 | {bio}                                               | 
  clonalorigin                  |      1 | {bio}                                               | 
  cmtk                          |      1 | {imaging}                                           | 
- cufflinks                     |      1 | {cloud,bio}                                         | 
+ cufflinks                     |      1 | {bio,cloud}                                         | 
  emboss-explorer               |      1 | {bio}                                               | 
  fastml                        |      1 | {bio}                                               | 
  hinge                         |      1 | {bio}                                               | 
@@ -67,14 +67,14 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  microbegps                    |      1 | {bio}                                               | 
  pigx-rnaseq                   |      1 | {covid-19,bio}                                      | 
  placnet                       |      1 | {bio}                                               | 
- plasmidid                     |      1 | {bio,covid-19}                                      | 
+ plasmidid                     |      1 | {covid-19,bio}                                      | 
  pplacer                       |      1 | {bio-phylogeny,covid-19,bio}                        | 
  pscan-chip                    |      1 | {bio}                                               | 
  python-seqcluster             |      1 | {bio}                                               | 
  rambo-k                       |      1 | {bio}                                               | 
  rdp-alignment                 |      1 | {bio}                                               | 
  rdp-classifier                |      1 | {bio}                                               | 
- rtax                          |      1 | {cloud,bio}                                         | 
+ rtax                          |      1 | {bio,cloud}                                         | 
  saint                         |      1 | {bio}                                               | 
  sga                           |      1 | {bio}                                               | 
  sift                          |      1 | {bio}                                               | 
@@ -86,7 +86,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  suitename                     |      1 | {bio}                                               | 
  surankco                      |      1 | {bio}                                               | 
  tophat-recondition            |      1 | {bio,covid-19}                                      | 
- varscan                       |      1 | {covid-19,bio}                                      | 
+ varscan                       |      1 | {bio,covid-19}                                      | 
  vienna-rna                    |      1 | {bio,covid-19}                                      | 
  acedb                         |      0 | {cloud,bio}                                         | 
  bambamc                       |      0 | {bio-dev}                                           | 
@@ -96,16 +96,16 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  btllib                        |      0 | {bio}                                               | 
  camp                          |      0 | {imaging-dev}                                       | 
  capsule-maven-nextflow        |      0 | {bio-dev}                                           | 
- cat-bat                       |      0 | {covid-19,bio}                                      | 
+ cat-bat                       |      0 | {bio,covid-19}                                      | 
  clonalframeml                 |      0 | {bio,covid-19}                                      | 
  ctn                           |      0 | {imaging-dev}                                       | 
  cutesv                        |      0 | {bio}                                               | 
- dextractor                    |      0 | {bio,covid-19}                                      | 
+ dextractor                    |      0 | {covid-19,bio}                                      | 
  eegdev                        |      0 | {imaging-dev}                                       | 
  elastix                       |      0 | {imaging}                                           | 
  embassy-domainatrix           |      0 | {bio,cloud}                                         | 
  embassy-domalign              |      0 | {bio,cloud}                                         | 
- embassy-domsearch             |      0 | {bio,cloud}                                         | 
+ embassy-domsearch             |      0 | {cloud,bio}                                         | 
  fis-gtm                       |      0 | {his}                                               | 
  gatk-bwamem                   |      0 | {bio-dev}                                           | 
  htscodecs                     |      0 | {bio-dev,covid-19}                                  | 
@@ -157,7 +157,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  plasmidseeker                 |      0 | {bio}                                               | 
  provean                       |      0 | {bio}                                               | 
  python-cgelib                 |      0 | {bio-dev}                                           | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
+ python-seqcluster             |      0 | {bio-dev,covid-19}                                  | 
  qcumber                       |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
  runcircos-gui                 |      0 | {bio}                                               | 
@@ -167,11 +167,11 @@ Last-Update: Sat, 30 Sep 2023 13:42:04 +0000
  seqan-needle                  |      0 | {bio}                                               | 
  sight                         |      0 | {imaging-dev}                                       | 
  ska                           |      0 | {bio}                                               | 
- smrtanalysis                  |      0 | {covid-19,bio}                                      | 
+ smrtanalysis                  |      0 | {bio,covid-19}                                      | 
  srf                           |      0 | {bio-dev}                                           | 
  surpyvor                      |      0 | {bio}                                               | 
  terraphast                    |      0 | {bio}                                               | 
- tipp                          |      0 | {covid-19,bio}                                      | 
+ tipp                          |      0 | {bio,covid-19}                                      | 
  trace2dbest                   |      0 | {bio}                                               | 
  xdffileio                     |      0 | {imaging-dev}                                       | 
  xpore                         |      0 | {bio}                                               | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
+Last-Update: Sun, 01 Oct 2023 01:42:08 +0000
 
        Source                              | Vote   |             Tasks                                                   |                                Tags                                
 -------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------------------
@@ -13,7 +13,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  cypari2                                   |    122 | {mathematics-dev}                                                   | 
  arpack                                    |     95 | {mathematics-dev}                                                   | 
  atlas                                     |     81 | {mathematics-dev}                                                   | 
- fftw                                      |     43 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
+ fftw                                      |     43 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
  flintqs                                   |     36 | {mathematics}                                                       | 
  pyzo                                      |     36 | {numericalcomputation}                                              | 
  arduino-mk                                |     35 | {robotics}                                                          | 
@@ -26,9 +26,9 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  libm4ri                                   |     22 | {mathematics-dev}                                                   | 
  libmatio                                  |     22 | {mathematics-dev}                                                   | 
  sketch                                    |     19 | {typesetting}                                                       | 
- fftw                                      |     18 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
+ fftw                                      |     18 | {physics-dev,meteorology-dev,mathematics-dev}                       | 
  gts                                       |     18 | {viewing-dev}                                                       | 
- rubiks                                    |     18 | {mathematics,geometry}                                              | 
+ rubiks                                    |     18 | {geometry,mathematics}                                              | 
  ros-ros-environment                       |     17 | {robotics-dev}                                                      | 
  cernlib                                   |     16 | {highenergy-physics}                                                | 
  geg                                       |     16 | {viewing}                                                           | 
@@ -46,7 +46,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  libzn-poly                                |     11 | {mathematics-dev}                                                   | 
  lxi-tools                                 |     11 | {engineering,dataacquisition}                                       | 
  urdfdom-headers                           |     11 | {robotics-dev}                                                      | 
- coinor-symphony                           |     10 | {logic,mathematics,numericalcomputation}                            | 
+ coinor-symphony                           |     10 | {logic,numericalcomputation,mathematics}                            | 
  gf2x                                      |     10 | {mathematics-dev}                                                   | 
  guiqwt                                    |     10 | {viewing,numericalcomputation}                                      | 
  iml                                       |     10 | {mathematics-dev}                                                   | 
@@ -58,40 +58,40 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  alberta                                   |      8 | {engineering-dev}                                                   | 
  amp                                       |      8 | {chemistry}                                                         | 
  cernlib                                   |      8 | {highenergy-physics}                                                | 
- libitpp                                   |      8 | {mathematics-dev,engineering-dev}                                   | 
+ libitpp                                   |      8 | {engineering-dev,mathematics-dev}                                   | 
  picosat                                   |      8 | {logic}                                                             | 
  libcgns                                   |      7 | {engineering-dev}                                                   | 
  mathgl                                    |      7 | {viewing}                                                           | 
  coinmp                                    |      6 | {numericalcomputation,logic,mathematics-dev}                        | 
- debian-science                            |      6 | {physics,mathematics,economics,nanoscale-physics,machine-learning}  | 
- debian-science                            |      6 | {economics,nanoscale-physics,machine-learning,physics}              | 
+ debian-science                            |      6 | {physics,machine-learning,economics,nanoscale-physics}              | 
+ debian-science                            |      6 | {physics,economics,nanoscale-physics,machine-learning,mathematics}  | 
  dune-istl                                 |      6 | {mathematics-dev}                                                   | 
  feff85exafs                               |      6 | {chemistry}                                                         | 
  hpcc                                      |      6 | {numericalcomputation,distributedcomputing}                         | 
  libcgns                                   |      6 | {engineering}                                                       | 
  opencascade                               |      6 | {simulations}                                                       | 
- persalys                                  |      6 | {statistics,engineering,mathematics}                                | 
- toulbar2                                  |      6 | {physics,logic,mathematics,numericalcomputation}                    | 
+ persalys                                  |      6 | {statistics,mathematics,engineering}                                | 
+ toulbar2                                  |      6 | {logic,physics,numericalcomputation,mathematics}                    | 
  apophenia                                 |      5 | {statistics}                                                        | 
  auto-07p                                  |      5 | {mathematics}                                                       | 
  form                                      |      5 | {mathematics}                                                       | 
- getdp                                     |      5 | {mathematics,engineering,simulations}                               | 
+ getdp                                     |      5 | {engineering,mathematics,simulations}                               | 
  ipe-tools                                 |      5 | {typesetting}                                                       | 
  libvigraimpex                             |      5 | {machine-learning,imageanalysis-dev}                                | 
  muparser                                  |      5 | {mathematics-dev}                                                   | 
  ompl                                      |      5 | {robotics-dev}                                                      | 
- persalys                                  |      5 | {statistics,engineering,mathematics}                                | 
+ persalys                                  |      5 | {mathematics,statistics,engineering}                                | 
  polylib                                   |      5 | {mathematics}                                                       | 
  psurface                                  |      5 | {numericalcomputation}                                              | 
  qwtplot3d                                 |      5 | {viewing-dev}                                                       | 
  ros-vcstool                               |      5 | {robotics-dev}                                                      | 
  debian-science                            |      4 | {machine-learning,neuroscience-cognitive}                           | 
- debian-science                            |      4 | {statistics,physics,nanoscale-physics,economics}                    | 
+ debian-science                            |      4 | {statistics,nanoscale-physics,physics,economics}                    | 
  dxsamples                                 |      4 | {nanoscale-physics}                                                 | 
  etsf-io                                   |      4 | {nanoscale-physics,physics}                                         | 
- jeuclid                                   |      4 | {viewing,typesetting}                                               | 
+ jeuclid                                   |      4 | {typesetting,viewing}                                               | 
  libccp4                                   |      4 | {nanoscale-physics-dev}                                             | 
- libvigraimpex                             |      4 | {machine-learning,imageanalysis-dev}                                | 
+ libvigraimpex                             |      4 | {imageanalysis-dev,machine-learning}                                | 
  mmdb                                      |      4 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  rheolef                                   |      4 | {mathematics}                                                       | 
  apertium-streamparser                     |      3 | {linguistics}                                                       | 
@@ -101,17 +101,17 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  code-saturne                              |      3 | {engineering-dev,mathematics-dev}                                   | 
  debian-science                            |      3 | {electrophysiology}                                                 | 
  dune-localfunctions                       |      3 | {mathematics-dev}                                                   | 
- libgtkdatabox                             |      3 | {engineering-dev,viewing-dev}                                       | 
+ libgtkdatabox                             |      3 | {viewing-dev,engineering-dev}                                       | 
  liblxi                                    |      3 | {engineering-dev,dataacquisition-dev}                               | 
  libmatheval                               |      3 | {mathematics}                                                       | 
  libmatheval                               |      3 | {mathematics-dev}                                                   | 
  libxsmm                                   |      3 | {mathematics-dev}                                                   | 
  lrcalc                                    |      3 | {mathematics}                                                       | 
- metis-edf                                 |      3 | {engineering,numericalcomputation}                                  | 
+ metis-edf                                 |      3 | {numericalcomputation,engineering}                                  | 
  openigtlink                               |      3 | {robotics-dev}                                                      | 
  python-escript                            |      3 | {engineering,numericalcomputation,simulations}                      | 
  sdpb                                      |      3 | {highenergy-physics,numericalcomputation}                           | 
- spfft                                     |      3 | {meteorology-dev,nanoscale-physics-dev,physics-dev,mathematics-dev} | 
+ spfft                                     |      3 | {mathematics-dev,physics-dev,nanoscale-physics-dev,meteorology-dev} | 
  syrthes                                   |      3 | {engineering}                                                       | 
  toon                                      |      3 | {numericalcomputation}                                              | 
  toontag                                   |      3 | {numericalcomputation}                                              | 
@@ -153,7 +153,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  fastjet                                   |      1 | {highenergy-physics-dev}                                            | 
  frog                                      |      1 | {linguistics}                                                       | 
  gemmlowp                                  |      1 | {mathematics-dev}                                                   | 
- hepmc3                                    |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ hepmc3                                    |      1 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  itsol                                     |      1 | {mathematics-dev}                                                   | 
  libdogleg                                 |      1 | {mathematics-dev}                                                   | 
  liblbfgs                                  |      1 | {mathematics-dev}                                                   | 
@@ -163,7 +163,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  morse-simulator                           |      1 | {robotics}                                                          | 
  mrmpi                                     |      1 | {tools}                                                             | 
  ncrystal                                  |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
- neartree                                  |      1 | {numericalcomputation,mathematics-dev}                              | 
+ neartree                                  |      1 | {mathematics-dev,numericalcomputation}                              | 
  openmesh                                  |      1 | {mathematics-dev}                                                   | 
  openmx                                    |      1 | {nanoscale-physics,physics}                                         | 
  openstereogram                            |      1 | {tools}                                                             | 
@@ -175,7 +175,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  ssm                                       |      1 | {nanoscale-physics}                                                 | 
  ssm                                       |      1 | {nanoscale-physics-dev}                                             | 
  timbl                                     |      1 | {linguistics}                                                       | 
- trilinos                                  |      1 | {engineering-dev,physics-dev,mathematics-dev}                       | 
+ trilinos                                  |      1 | {physics-dev,mathematics-dev,engineering-dev}                       | 
  ucto                                      |      1 | {linguistics}                                                       | 
  ufo-core                                  |      1 | {nanoscale-physics-dev}                                             | 
  vdt                                       |      1 | {mathematics-dev}                                                   | 
@@ -186,8 +186,8 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  apertium-swe-dan                          |      0 | {linguistics}                                                       | 
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
- calculix-ccx-doc                          |      0 | {engineering,numericalcomputation,simulations}                      | 
- calculix-ccx-test                         |      0 | {numericalcomputation,engineering,simulations}                      | 
+ calculix-ccx-doc                          |      0 | {simulations,numericalcomputation,engineering}                      | 
+ calculix-ccx-test                         |      0 | {simulations,numericalcomputation,engineering}                      | 
  cernlib                                   |      0 | {highenergy-physics}                                                | 
  cernlib                                   |      0 | {highenergy-physics-dev}                                            | 
  cernlib                                   |      0 | {highenergy-physics,physics}                                        | 
@@ -247,7 +247,7 @@ Last-Update: Sat, 30 Sep 2023 13:42:07 +0000
  sagemath-database-graphs                  |      0 | {mathematics}                                                       | 
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
  sardana                                   |      0 | {dataacquisition}                                                   | 
- schroedinger-maeparser                    |      0 | {nanoscale-physics-dev,chemistry}                                   | 
+ schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
  slicot                                    |      0 | {engineering-dev,robotics-dev}                                      | 
  tachyon                                   |      0 | {mathematics}                                                       | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 30 Sep 2023 13:42:10 +0000
+Last-Update: Sun, 01 Oct 2023 01:42:11 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c4fecb79253b0d9355a31a06d120ca76c1c47a69

-- 
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