[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Sep 17 02:43:54 BST 2023



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
9b34f9f3 by Andreas Tille at 2023-09-17T01:43:45+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,15 +1,15 @@
-Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
+Last-Update: Sun, 17 Sep 2023 01:42:05 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- orthanc                       |    104 | {practice,covid-19,imaging}                         | 
- orthanc-wsi                   |     52 | {laboratory,oncology,covid-19,imaging,practice,his} | 
+ orthanc                       |    104 | {practice,imaging,covid-19}                         | 
+ orthanc-wsi                   |     52 | {laboratory,practice,his,covid-19,oncology,imaging} | 
  dicomscope                    |     23 | {imaging}                                           | 
  orthanc-webviewer             |     22 | {imaging}                                           | 
  amide                         |     20 | {imaging}                                           | 
  orthanc-dicomweb              |     12 | {imaging,covid-19}                                  | 
  orthanc-postgresql            |     11 | {imaging}                                           | 
- oscar                         |     11 | {tools,data,practice}                               | 
+ oscar                         |     11 | {data,practice,tools}                               | 
  icb-utils                     |     10 | {bio-dev}                                           | 
  gnumed-server                 |      9 | {covid-19,practice}                                 | 
  orthanc-mysql                 |      8 | {imaging}                                           | 
@@ -18,7 +18,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  mia                           |      7 | {imaging}                                           | 
  mrtrix3                       |      7 | {imaging}                                           | 
  orthanc-gdcm                  |      7 | {imaging}                                           | 
- king                          |      5 | {imaging,typesetting}                               | 
+ king                          |      5 | {typesetting,imaging}                               | 
  adun.app                      |      4 | {bio}                                               | 
  bart-view                     |      4 | {imaging}                                           | 
  biojava-live                  |      4 | {bio-dev}                                           | 
@@ -36,12 +36,12 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  jebl2                         |      2 | {bio-dev}                                           | 
  orthanc-neuro                 |      2 | {imaging,psychology}                                | 
  pymia                         |      2 | {imaging-dev}                                       | 
- treeview                      |      2 | {bio-phylogeny,bio}                                 | 
- varscan                       |      2 | {covid-19,bio}                                      | 
+ treeview                      |      2 | {bio,bio-phylogeny}                                 | 
+ varscan                       |      2 | {bio,covid-19}                                      | 
  bitseq                        |      1 | {bio}                                               | 
  blimps                        |      1 | {bio}                                               | 
  clonalorigin                  |      1 | {bio}                                               | 
- cufflinks                     |      1 | {cloud,bio}                                         | 
+ cufflinks                     |      1 | {bio,cloud}                                         | 
  embassy-domainatrix           |      1 | {bio,cloud}                                         | 
  emboss-explorer               |      1 | {bio}                                               | 
  libbpp-core                   |      1 | {bio-dev}                                           | 
@@ -57,9 +57,9 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  rdp-alignment                 |      1 | {bio}                                               | 
  sibsim4                       |      1 | {bio,cloud}                                         | 
  sift                          |      1 | {bio}                                               | 
- spread-phy                    |      1 | {bio-phylogeny,bio}                                 | 
+ spread-phy                    |      1 | {bio,bio-phylogeny}                                 | 
  surankco                      |      1 | {bio}                                               | 
- thesias                       |      1 | {covid-19,bio}                                      | 
+ thesias                       |      1 | {bio,covid-19}                                      | 
  tracetuner                    |      1 | {bio}                                               | 
  vienna-rna                    |      1 | {bio,covid-19}                                      | 
  acedb                         |      0 | {cloud,bio}                                         | 
@@ -67,7 +67,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  arden                         |      0 | {cloud,bio}                                         | 
  assemblytics                  |      0 | {bio}                                               | 
  bambamc                       |      0 | {bio-dev}                                           | 
- beast-mcmc                    |      0 | {bio-phylogeny,bio}                                 | 
+ beast-mcmc                    |      0 | {bio,bio-phylogeny}                                 | 
  biojava4-live                 |      0 | {bio-dev}                                           | 
  biosyntax                     |      0 | {bio}                                               | 
  brig                          |      0 | {bio}                                               | 
@@ -75,15 +75,15 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  btllib                        |      0 | {bio}                                               | 
  camp                          |      0 | {imaging-dev}                                       | 
  capsule-maven-nextflow        |      0 | {bio-dev}                                           | 
- cat-bat                       |      0 | {covid-19,bio}                                      | 
+ cat-bat                       |      0 | {bio,covid-19}                                      | 
  clonalframeml                 |      0 | {bio,covid-19}                                      | 
  ctn                           |      0 | {imaging-dev}                                       | 
  cutesv                        |      0 | {bio}                                               | 
- dextractor                    |      0 | {bio,covid-19}                                      | 
+ dextractor                    |      0 | {covid-19,bio}                                      | 
  eegdev                        |      0 | {imaging-dev}                                       | 
  elastix                       |      0 | {imaging}                                           | 
  embassy-domalign              |      0 | {bio,cloud}                                         | 
- embassy-domsearch             |      0 | {bio,cloud}                                         | 
+ embassy-domsearch             |      0 | {cloud,bio}                                         | 
  fastml                        |      0 | {bio}                                               | 
  fis-gtm                       |      0 | {his}                                               | 
  gatk-bwamem                   |      0 | {bio-dev}                                           | 
@@ -137,19 +137,19 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  pigx-rnaseq                   |      0 | {covid-19,bio}                                      | 
  pique                         |      0 | {bio}                                               | 
  placnet                       |      0 | {bio}                                               | 
- plasmidid                     |      0 | {bio,covid-19}                                      | 
+ plasmidid                     |      0 | {covid-19,bio}                                      | 
  plasmidseeker                 |      0 | {bio}                                               | 
  pplacer                       |      0 | {bio-phylogeny,covid-19,bio}                        | 
  proalign                      |      0 | {bio-phylogeny,bio}                                 | 
  provean                       |      0 | {bio}                                               | 
  pscan-chip                    |      0 | {bio}                                               | 
  python-cgelib                 |      0 | {bio-dev}                                           | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                                  | 
+ python-seqcluster             |      0 | {bio-dev,covid-19}                                  | 
  python-seqcluster             |      0 | {bio}                                               | 
  rambo-k                       |      0 | {bio}                                               | 
  rdp-classifier                |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
- rtax                          |      0 | {cloud,bio}                                         | 
+ rtax                          |      0 | {bio,cloud}                                         | 
  runcircos-gui                 |      0 | {bio}                                               | 
  saint                         |      0 | {bio}                                               | 
  savvy                         |      0 | {bio-dev}                                           | 
@@ -161,7 +161,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  sight                         |      0 | {imaging-dev}                                       | 
  ska                           |      0 | {bio}                                               | 
  skesa                         |      0 | {bio}                                               | 
- smrtanalysis                  |      0 | {covid-19,bio}                                      | 
+ smrtanalysis                  |      0 | {bio,covid-19}                                      | 
  soapaligner                   |      0 | {bio}                                               | 
  soapsnp                       |      0 | {bio}                                               | 
  sortmerna                     |      0 | {bio}                                               | 
@@ -172,7 +172,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:06 +0000
  surpyvor                      |      0 | {bio}                                               | 
  terraphast                    |      0 | {bio}                                               | 
  terraphast                    |      0 | {bio-dev}                                           | 
- tipp                          |      0 | {covid-19,bio}                                      | 
+ tipp                          |      0 | {bio,covid-19}                                      | 
  tophat-recondition            |      0 | {bio,covid-19}                                      | 
  trace2dbest                   |      0 | {bio}                                               | 
  xdffileio                     |      0 | {imaging-dev}                                       | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
+Last-Update: Sun, 17 Sep 2023 01:42:08 +0000
 
        Source                              | Vote   |             Tasks                                                   |                                Tags                                
 -------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------------------
@@ -15,7 +15,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  atlas                                     |     73 | {mathematics-dev}                                                   | 
  scalapack                                 |     43 | {nanoscale-physics-dev}                                             | 
  arduino-mk                                |     36 | {robotics}                                                          | 
- fftw                                      |     36 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
+ fftw                                      |     36 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
  imview                                    |     32 | {viewing}                                                           | 
  ntl                                       |     31 | {mathematics-dev}                                                   | 
  flintqs                                   |     30 | {mathematics}                                                       | 
@@ -26,12 +26,12 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  pyzo                                      |     21 | {numericalcomputation}                                              | 
  cliquer                                   |     20 | {mathematics}                                                       | 
  libm4ri                                   |     19 | {mathematics-dev}                                                   | 
- rubiks                                    |     18 | {mathematics,geometry}                                              | 
+ rubiks                                    |     18 | {geometry,mathematics}                                              | 
  sketch                                    |     18 | {typesetting}                                                       | 
  cernlib                                   |     17 | {highenergy-physics}                                                | 
  ros-ros-environment                       |     17 | {robotics-dev}                                                      | 
  gts                                       |     16 | {viewing-dev}                                                       | 
- fftw                                      |     15 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
+ fftw                                      |     15 | {physics-dev,meteorology-dev,mathematics-dev}                       | 
  vitables                                  |     15 | {numericalcomputation}                                              | 
  dune-uggrid                               |     14 | {mathematics-dev}                                                   | 
  setzer                                    |     14 | {typesetting}                                                       | 
@@ -46,7 +46,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  picosat                                   |     10 | {logic}                                                             | 
  ros-rosconsole                            |     10 | {robotics-dev}                                                      | 
  cernlib                                   |      9 | {highenergy-physics-dev}                                            | 
- coinor-symphony                           |      9 | {logic,mathematics,numericalcomputation}                            | 
+ coinor-symphony                           |      9 | {logic,numericalcomputation,mathematics}                            | 
  iml                                       |      9 | {mathematics-dev}                                                   | 
  libhomfly                                 |      9 | {mathematics-dev}                                                   | 
  libm4rie                                  |      9 | {mathematics-dev}                                                   | 
@@ -55,7 +55,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  lrcalc                                    |      8 | {mathematics-dev}                                                   | 
  gf2x                                      |      7 | {mathematics-dev}                                                   | 
  gfsview                                   |      7 | {viewing}                                                           | 
- libitpp                                   |      7 | {mathematics-dev,engineering-dev}                                   | 
+ libitpp                                   |      7 | {engineering-dev,mathematics-dev}                                   | 
  libzn-poly                                |      7 | {mathematics-dev}                                                   | 
  ratpoints                                 |      7 | {mathematics-dev}                                                   | 
  teem                                      |      7 | {imageanalysis}                                                     | 
@@ -69,7 +69,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  apophenia                                 |      5 | {statistics}                                                        | 
  auto-07p                                  |      5 | {mathematics}                                                       | 
  coinmp                                    |      5 | {numericalcomputation,logic,mathematics-dev}                        | 
- debian-science                            |      5 | {economics,nanoscale-physics,machine-learning,physics}              | 
+ debian-science                            |      5 | {physics,machine-learning,economics,nanoscale-physics}              | 
  dxsamples                                 |      5 | {nanoscale-physics}                                                 | 
  form                                      |      5 | {mathematics}                                                       | 
  hpcc                                      |      5 | {numericalcomputation,distributedcomputing}                         | 
@@ -77,13 +77,13 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  muparser                                  |      5 | {mathematics-dev}                                                   | 
  ompl                                      |      5 | {robotics-dev}                                                      | 
  opencascade                               |      5 | {simulations}                                                       | 
- persalys                                  |      5 | {statistics,engineering,mathematics}                                | 
+ persalys                                  |      5 | {statistics,mathematics,engineering}                                | 
  polylib                                   |      5 | {mathematics}                                                       | 
  ros-vcstool                               |      5 | {robotics-dev}                                                      | 
- debian-science                            |      4 | {physics,mathematics,economics,nanoscale-physics,machine-learning}  | 
+ debian-science                            |      4 | {physics,economics,nanoscale-physics,machine-learning,mathematics}  | 
  ipe-tools                                 |      4 | {typesetting}                                                       | 
  libvigraimpex                             |      4 | {machine-learning,imageanalysis-dev}                                | 
- metis-edf                                 |      4 | {engineering,numericalcomputation}                                  | 
+ metis-edf                                 |      4 | {numericalcomputation,engineering}                                  | 
  uctodata                                  |      4 | {linguistics}                                                       | 
  apertium-streamparser                     |      3 | {linguistics}                                                       | 
  apriltag                                  |      3 | {robotics-dev}                                                      | 
@@ -91,21 +91,21 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  coda                                      |      3 | {meteorology}                                                       | 
  coda                                      |      3 | {meteorology-dev}                                                   | 
  code-saturne                              |      3 | {engineering-dev,mathematics-dev}                                   | 
- debian-science                            |      3 | {statistics,physics,nanoscale-physics,economics}                    | 
+ debian-science                            |      3 | {statistics,nanoscale-physics,physics,economics}                    | 
  dune-localfunctions                       |      3 | {mathematics-dev}                                                   | 
  etsf-io                                   |      3 | {nanoscale-physics,physics}                                         | 
- getdp                                     |      3 | {mathematics,engineering,simulations}                               | 
+ getdp                                     |      3 | {engineering,mathematics,simulations}                               | 
  libccp4                                   |      3 | {nanoscale-physics-dev}                                             | 
- libgtkdatabox                             |      3 | {engineering-dev,viewing-dev}                                       | 
- libvigraimpex                             |      3 | {machine-learning,imageanalysis-dev}                                | 
+ libgtkdatabox                             |      3 | {viewing-dev,engineering-dev}                                       | 
+ libvigraimpex                             |      3 | {imageanalysis-dev,machine-learning}                                | 
  libxsmm                                   |      3 | {mathematics-dev}                                                   | 
  nrn-iv                                    |      3 | {biology}                                                           | 
  openigtlink                               |      3 | {robotics-dev}                                                      | 
- persalys                                  |      3 | {statistics,engineering,mathematics}                                | 
+ persalys                                  |      3 | {mathematics,statistics,engineering}                                | 
  psurface                                  |      3 | {numericalcomputation}                                              | 
  qwtplot3d                                 |      3 | {viewing-dev}                                                       | 
  syrthes                                   |      3 | {engineering}                                                       | 
- toulbar2                                  |      3 | {physics,logic,mathematics,numericalcomputation}                    | 
+ toulbar2                                  |      3 | {logic,physics,numericalcomputation,mathematics}                    | 
  apache-opennlp                            |      2 | {linguistics}                                                       | 
  apophenia                                 |      2 | {statistics}                                                        | 
  cernlib                                   |      2 | {highenergy-physics}                                                | 
@@ -114,7 +114,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  debian-science                            |      2 | {electrophysiology}                                                 | 
  debian-science                            |      2 | {psychophysics}                                                     | 
  debian-science                            |      2 | {machine-learning,neuroscience-cognitive}                           | 
- jeuclid                                   |      2 | {viewing,typesetting}                                               | 
+ jeuclid                                   |      2 | {typesetting,viewing}                                               | 
  jhdf                                      |      2 | {engineering}                                                       | 
  libmatheval                               |      2 | {mathematics}                                                       | 
  libmatheval                               |      2 | {mathematics-dev}                                                   | 
@@ -156,7 +156,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  python-escript                            |      1 | {engineering,numericalcomputation,simulations}                      | 
  sardana                                   |      1 | {dataacquisition}                                                   | 
  scram                                     |      1 | {engineering}                                                       | 
- spfft                                     |      1 | {meteorology-dev,nanoscale-physics-dev,physics-dev,mathematics-dev} | 
+ spfft                                     |      1 | {mathematics-dev,physics-dev,nanoscale-physics-dev,meteorology-dev} | 
  taurus                                    |      1 | {dataacquisition}                                                   | 
  timbl                                     |      1 | {linguistics}                                                       | 
  veccore                                   |      1 | {mathematics-dev}                                                   | 
@@ -168,8 +168,8 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  apertium-swe-dan                          |      0 | {linguistics}                                                       | 
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
- calculix-ccx-doc                          |      0 | {engineering,numericalcomputation,simulations}                      | 
- calculix-ccx-test                         |      0 | {numericalcomputation,engineering,simulations}                      | 
+ calculix-ccx-doc                          |      0 | {simulations,numericalcomputation,engineering}                      | 
+ calculix-ccx-test                         |      0 | {simulations,numericalcomputation,engineering}                      | 
  cernlib                                   |      0 | {highenergy-physics-dev}                                            | 
  cernlib                                   |      0 | {highenergy-physics}                                                | 
  cernlib                                   |      0 | {highenergy-physics,physics}                                        | 
@@ -192,7 +192,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  gemmlowp                                  |      0 | {mathematics-dev}                                                   | 
  glpk-java                                 |      0 | {mathematics-dev}                                                   | 
  harp                                      |      0 | {meteorology}                                                       | 
- hepmc3                                    |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ hepmc3                                    |      0 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  irstlm                                    |      0 | {linguistics}                                                       | 
  itsol                                     |      0 | {mathematics-dev}                                                   | 
  libcvd                                    |      0 | {imageanalysis-dev}                                                 | 
@@ -216,7 +216,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  metis-edf                                 |      0 | {engineering-dev}                                                   | 
  mseed2sac                                 |      0 | {dataacquisition-dev}                                               | 
  ncrystal                                  |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
- neartree                                  |      0 | {numericalcomputation,mathematics-dev}                              | 
+ neartree                                  |      0 | {mathematics-dev,numericalcomputation}                              | 
  nrn-mod2c                                 |      0 | {biology}                                                           | 
  ompl                                      |      0 | {robotics}                                                          | 
  opengv                                    |      0 | {geometry}                                                          | 
@@ -239,7 +239,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  sagemath-database-graphs                  |      0 | {mathematics}                                                       | 
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
  schroedinger-coordgenlibs                 |      0 | {chemistry,nanoscale-physics-dev}                                   | 
- schroedinger-maeparser                    |      0 | {nanoscale-physics-dev,chemistry}                                   | 
+ schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
  slicot                                    |      0 | {engineering-dev,robotics-dev}                                      | 
  sparskit                                  |      0 | {mathematics-dev}                                                   | 
@@ -252,7 +252,7 @@ Last-Update: Sat, 16 Sep 2023 13:42:09 +0000
  toon                                      |      0 | {numericalcomputation}                                              | 
  toontag                                   |      0 | {numericalcomputation}                                              | 
  triangle                                  |      0 | {physics-dev}                                                       | 
- trilinos                                  |      0 | {engineering-dev,physics-dev,mathematics-dev}                       | 
+ trilinos                                  |      0 | {physics-dev,mathematics-dev,engineering-dev}                       | 
  tulip                                     |      0 | {viewing-dev}                                                       | 
  ucto                                      |      0 | {linguistics}                                                       | 
  ufo-core                                  |      0 | {nanoscale-physics-dev}                                             | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 16 Sep 2023 13:42:12 +0000
+Last-Update: Sun, 17 Sep 2023 01:42:10 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9b34f9f334eb3b720cfddfd97b8b50d01cfdc2a4

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View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9b34f9f334eb3b720cfddfd97b8b50d01cfdc2a4
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