[med-svn] [Git][med-team/snakemake][debian-v7] remove patch to see if it causes the hang

[Rebecca N. Palmer (@rnpalmer-guest)]

Rebecca N. Palmer pushed to branch debian-v7 at Debian Med / snakemake


Commits:
79002eb6 by Rebecca N. Palmer at 2024-08-03T12:21:25+01:00
remove patch to see if it causes the hang

- - - - -


3 changed files:

- debian/changelog
- debian/patches/cancelscript_debug.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,10 +1,9 @@
-snakemake (7.32.4-4) unstable; urgency=medium
+snakemake (7.32.4-4) UNRELEASED; urgency=medium
 
-  * Tests: don't fail if the pipe buffer is small.
   * Skip tests that crash in persistent_dict because
     Debian's pytools is too old (workaround for #1076925).
 
- -- Rebecca N. Palmer <rebecca_palmer at zoho.com>  Sat, 03 Aug 2024 11:28:52 +0100
+ -- Rebecca N. Palmer <rebecca_palmer at zoho.com>  Sat, 03 Aug 2024 12:20:32 +0100
 
 snakemake (7.32.4-3) unstable; urgency=medium
 


=====================================
debian/patches/cancelscript_debug.patch
=====================================
@@ -7,13 +7,13 @@ Forwarded: not-needed
 
 --- a/tests/common.py
 +++ b/tests/common.py
-@@ -257,6 +257,10 @@ def run(
+@@ -251,6 +251,10 @@ def run(
          )
  
      if shouldfail:
 +        if shellcmd and "cancel" in shellcmd:
-+            #import io;print("buffer size",io.DEFAULT_BUFFER_SIZE)
-+            print("cancel stdout:",run_stdout,run_stdout2,"\nWorkdir:")
++            import io;print("buffer size",io.DEFAULT_BUFFER_SIZE)
++            #print("cancel stdout:",run_stdout,run_stdout2,"\nWorkdir:")
 +            print_tree(tmpdir, exclude=".snakemake/conda")
          assert not success, "expected error on execution"
      else:


=====================================
debian/patches/series
=====================================
@@ -18,5 +18,5 @@ skip-test_workflow_calling.patch
 no_mix_tabs_spaces.patch
 fstring.patch
 1068010_appdirs_to_platformdirs.patch
-test_piperead.patch
+#test_piperead.patch
 cancelscript_debug.patch



View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/79002eb68476b5b165e1bf80d448840b81251506

-- 
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/79002eb68476b5b165e1bf80d448840b81251506
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