[med-svn] [Git][med-team/bbmap][master] 4 commits: New upstream version 39.08+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / bbmap


Commits:
70a44268 by Étienne Mollier at 2024-08-09T10:06:24+02:00
New upstream version 39.08+dfsg
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60352601 by Étienne Mollier at 2024-08-09T10:06:32+02:00
Update upstream source from tag 'upstream/39.08+dfsg'

Update to upstream version '39.08+dfsg'
with Debian dir 771762c7776ae2eeced73d8f15e38fe039f9db4f
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897a36b4 by Étienne Mollier at 2024-08-09T10:17:24+02:00
d/control: declare compliance to standards version 4.7.0.

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cef006dd by Étienne Mollier at 2024-08-09T10:18:46+02:00
Ready to upload to unstable.

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23 changed files:

- README.md
- bbmerge.sh
- + cg2illumina.sh
- + comparelabels.sh
- countbarcodes.sh
- countbarcodes2.sh
- current/align2/RandomReads3.java
- current/aligner/AllToAll.java
- + current/aligner/MicroAligner.java
- + current/aligner/MicroAligner2.java
- current/aligner/SingleStateAlignerFlat2.java
- current/assemble/TadPipe.java
- current/barcode/AnalyzeBarcodes.java
- current/barcode/Barcode.java
- + current/barcode/BarcodeCounter.java
- current/barcode/BarcodeStats.java
- + current/barcode/CompareLabels.java
- current/barcode/CorrelateBarcodes.java
- current/barcode/CountBarcodes.java
- current/barcode/CountBarcodes2.java
- + current/barcode/DemuxClient.java
- + current/barcode/DemuxData.java
- + current/barcode/DemuxServer.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/ab9a6e0a4b90f0e5449187b41e44206a3cc74897...cef006dd4452b31149ed9481cae8787f7d051592

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View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/ab9a6e0a4b90f0e5449187b41e44206a3cc74897...cef006dd4452b31149ed9481cae8787f7d051592
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