[med-svn] [Git][med-team/roary][master] 4 commits: Move file to original place after build (Closes: #1047005, #1049576)

[Ananthu C V (@weepingclown)]

Ananthu C V pushed to branch master at Debian Med / roary


Commits:
e4425613 by Ananthu C V at 2024-12-02T22:54:21+05:30
Move file to original place after build (Closes: #1047005, #1049576)

- - - - -
359d77ff by Ananthu C V at 2024-12-02T22:54:45+05:30
Remove language suffix from installed scripts

- - - - -
3efe76d8 by Ananthu C V at 2024-12-02T22:56:34+05:30
Bump standards version to 4.7.0 (no changes needed)

- - - - -
992cb679 by Ananthu C V at 2024-12-02T23:01:19+05:30
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,5 +1,6 @@
-roary (3.13.0+dfsg-2) UNRELEASED; urgency=medium
+roary (3.13.0+dfsg-2) unstable; urgency=medium
 
+  [ Andreas Tille ]
   * Team upload.
   * Use common naming scheme for autopkgtest scripts
   * Provide autopkgtest as user example
@@ -11,8 +12,17 @@ roary (3.13.0+dfsg-2) UNRELEASED; urgency=medium
   * Drop unneeded lintian-overrides
   * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
     Repository-Browse.
+  * Add debug for "Cannot find the mcxdeblast executable, please ensure
+    its in your PATH"
+  * Fix autopkgtest
+  * The missing mcxdeblast issue is gone
 
- -- Andreas Tille <tille at debian.org>  Wed, 16 Nov 2022 07:40:26 +0100
+  [ Ananthu C V ]
+  * Move file to original place after build (Closes: #1047005, #1049576)
+  * Remove language suffix from installed scripts
+  * Bump standards version to 4.7.0 (no changes needed)
+
+ -- Ananthu C V <weepingclown at disroot.org>  Mon, 02 Dec 2024 23:00:41 +0530
 
 roary (3.13.0+dfsg-1) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -35,7 +35,7 @@ Build-Depends: debhelper-compat (= 13),
                mafft,
                fasttree
 Build-Depends-Indep: perl
-Standards-Version: 4.6.1
+Standards-Version: 4.7.0
 Vcs-Browser: https://salsa.debian.org/med-team/roary
 Vcs-Git: https://salsa.debian.org/med-team/roary.git
 Homepage: https://sanger-pathogens.github.io/Roary/


=====================================
debian/rules
=====================================
@@ -6,9 +6,15 @@
 override_dh_dzil_build:
 	mv bin/create_pan_genome_plots.R bin/create_pan_genome_plots
 	dh_dzil_build --
+	mv bin/create_pan_genome_plots bin/create_pan_genome_plots.R
 
 override_dh_auto_test:
 ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	# Hmmm, seems the test is not automatically run anyway by the build system
 	dh_auto_test || true
 endif
+
+export ROARY_BIN=debian/roary/usr/bin
+execute_after_dh_install:
+	# debian policy 10.4
+	mv ${ROARY_BIN}/roary-create_pan_genome_plots.R ${ROARY_BIN}/roary-create_pan_genome_plots



View it on GitLab: https://salsa.debian.org/med-team/roary/-/compare/9785d4a3b93cd6e46ac6afcbc1bfcb0654fe4b98...992cb6797488c04bf3435c0b4ba1ed59e9ff0cb2

-- 
View it on GitLab: https://salsa.debian.org/med-team/roary/-/compare/9785d4a3b93cd6e46ac6afcbc1bfcb0654fe4b98...992cb6797488c04bf3435c0b4ba1ed59e9ff0cb2
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20241202/01c7d696/attachment-0001.htm>