[med-svn] [Git][med-team/htseq][upstream] New upstream version 2.0.9+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / htseq


Commits:
e28bd04f by Andreas Tille at 2024-12-07T17:51:34+01:00
New upstream version 2.0.9+dfsg
- - - - -


30 changed files:

- .ci_deploy.sh
- .github/workflows/ci.yml
- .github/workflows/deploy.yml
- − HTSeq/_version.py
- HTSeq/features.py
- HTSeq/scripts/count.py
- HTSeq/scripts/count_with_barcodes.py
- − PKG-INFO
- VERSION
- deploywheels.sh
- doc/features.rst
- doc/history.rst
- doc/htseqcount.rst
- + doc/images/highc_fig1.png
- + doc/images/highc_fig2.png
- + doc/images/highc_fig3.png
- + doc/images/highc_fig4.png
- + doc/tutorials/bam_reader.rst
- + doc/tutorials/fastx_reader.rst
- + doc/tutorials/highc.rst
- + doc/tutorials/step_vs_stretch_vector.rst
- + doc/tutorials/tutorial_exon_level.rst
- + example_data/10x_pbmc1k/3_cells/cell1.bam
- + example_data/10x_pbmc1k/3_cells/cell2.bam
- + example_data/10x_pbmc1k/3_cells/cell3.bam
- + example_data/10x_pbmc1k/HomoSapiens.GRCh38-2020-A_subsampled.gtf
- + example_data/10x_pbmc1k/subsampled_with_missing_barcodes.sam
- + example_data/GCF_000001405.39_GRCh38.p13_genomic_subsample.gff.gz
- + example_data/Saccharomyces_cerevisiae.SGD1.01.56_multiple_types.gtf.gz
- + example_data/contig_overlap_no_warning_stderr.txt


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/htseq/-/commit/e28bd04f25d3f99dacc068103a58d0299415d1fd

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View it on GitLab: https://salsa.debian.org/med-team/htseq/-/commit/e28bd04f25d3f99dacc068103a58d0299415d1fd
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