[med-svn] [Git][med-team/sortmerna][master] 3 commits: Forward patch

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / sortmerna


Commits:
45bcce46 by Andreas Tille at 2024-12-11T17:35:08+01:00
Forward patch

- - - - -
ddba3005 by Andreas Tille at 2024-12-11T17:38:08+01:00
d/copyright: Fixes thanks to lrc

- - - - -
ac72f3c6 by Andreas Tille at 2024-12-11T17:40:52+01:00
Upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/copyright
- debian/patches/pyhon3.12-syntax.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,9 +1,10 @@
-sortmerna (4.3.7-2) UNRELEASED; urgency=medium
+sortmerna (4.3.7-2) unstable; urgency=medium
 
   * Fix Python3.12 string syntax
     Closes: #1087092
+  * d/copyright: Fixes thanks to lrc
 
- -- Andreas Tille <tille at debian.org>  Wed, 11 Dec 2024 17:26:57 +0100
+ -- Andreas Tille <tille at debian.org>  Wed, 11 Dec 2024 17:38:13 +0100
 
 sortmerna (4.3.7-1) unstable; urgency=medium
 


=====================================
debian/copyright
=====================================
@@ -34,16 +34,41 @@ License: PublicDomain
  .
  Please cite the author in any work or product based on this material.
 
+Files: include/kseq.h
+Copyright: 2008 Genome Research Ltd (GRL)
+License: Expat
+
+Files: include/sse2neon.h
+Copyright: 2015-2024 SSE2NEON Contributors.
+License: Expat
+
+Files: src/sortmerna/ssw.c
+Copyright: 2012-1015 Boston College.
+           Mengyao Zhao <zhangmp at bc.edu>
+License: expat
+
 Files: debian/*
 Copyright: 2015 Tim Booth <tbooth at ceh.ac.uk>
            2015-2022 Andreas Tille <tille at debian.org>
            2023 Étienne Mollier <emollier at debian.org>
 License: LGPL-3+
 
-Files: src/sortmerna/ssw.c
-Copyright: 2012-1015 Boston College.
-           Mengyao Zhao <zhangmp at bc.edu>
-License: expat
+
+License: LGPL-3+
+ SortMeRNA is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Lesser General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ SortMeRNA is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU Lesser General Public License for more details.
+ .
+ On Debian systems you can find a copy of the GNU Lesser General
+ Public License in /usr/share/common-licenses/LGPL.
+
+License: Expat
    Permission is hereby granted, free of charge, to any person obtaining
    a copy of this software and associated documentation files (the
    "Software"), to deal in the Software without restriction, including
@@ -64,17 +89,3 @@ License: expat
    CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
    SOFTWARE.
 
-License: LGPL-3+
- SortMeRNA is free software: you can redistribute it and/or modify
- it under the terms of the GNU Lesser General Public License as published by
- the Free Software Foundation, either version 3 of the License, or
- (at your option) any later version.
- .
- SortMeRNA is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- GNU Lesser General Public License for more details.
- .
- On Debian systems you can find a copy of the GNU Lesser General
- Public License in /usr/share/common-licenses/LGPL.
-


=====================================
debian/patches/pyhon3.12-syntax.patch
=====================================
@@ -2,6 +2,7 @@ Description: Fix Python3.12 string syntax
 Bug-Debian: https://bugs.debian.org/1087092
 Author: Andreas Tille <tille at debian.org>
 Last-Update: 2024-06-11
+Forwarded: https://github.com/sortmerna/sortmerna/issues/434
 
 --- a/scripts/run.py
 +++ b/scripts/run.py



View it on GitLab: https://salsa.debian.org/med-team/sortmerna/-/compare/cae3d43e1a978390e0d16434b00323189933015b...ac72f3c65f2c2b0f883888c13e16004e15144e22

-- 
View it on GitLab: https://salsa.debian.org/med-team/sortmerna/-/compare/cae3d43e1a978390e0d16434b00323189933015b...ac72f3c65f2c2b0f883888c13e16004e15144e22
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