[med-svn] [Git][med-team/diamond-aligner][upstream] New upstream version 2.1.9

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / diamond-aligner


Commits:
9ad2c181 by Andreas Tille at 2024-02-07T11:17:27+01:00
New upstream version 2.1.9
- - - - -


30 changed files:

- CMakeLists.txt
- README.md
- src/ChangeLog
- src/align/align.cpp
- src/align/extend.cpp
- src/align/global_ranking/table.cpp
- src/align/legacy/query_mapper.cpp
- src/align/output.cpp
- src/align/ungapped.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/hssp.cpp
- src/basic/match.h
- src/basic/seed_iterator.h
- src/basic/sequence.h
- src/basic/translated_position.h
- src/basic/value.h
- src/cluster/cascaded/cascaded.cpp
- src/cluster/cascaded/cascaded.h
- src/cluster/cascaded/helpers.cpp
- src/cluster/cascaded/recluster.cpp
- src/cluster/cascaded/wrapper.cpp
- src/cluster/cluster.h
- src/cluster/cluster_registry.h
- src/cluster/helpers.cpp
- − src/cluster/incremental/common.h
- − src/cluster/incremental/config.cpp
- − src/cluster/incremental/incremental.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/commit/9ad2c181ada975d0a48f6dbcba2cf9fc1ce27ce4

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