[med-svn] [Git][med-team/q2-dada2][upstream] New upstream version 2024.2.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / q2-dada2


Commits:
e95c33e9 by Andreas Tille at 2024-02-18T12:45:57+01:00
New upstream version 2024.2.0
- - - - -


30 changed files:

- .github/workflows/ci-dev.yaml
- README.md
- q2_dada2/_denoise.py
- q2_dada2/_version.py
- q2_dada2/plugin_setup.py
- q2_dada2/tests/data/expected/paired-default-stats.tsv
- q2_dada2/tests/data/expected/paired-default.tsv
- q2_dada2/tests/data/expected/paired-override-stats.tsv
- q2_dada2/tests/data/expected/paired-override.tsv
- + q2_dada2/tests/data/expected/paired-remove-empty-default.tsv
- q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_36_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_10_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_36_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_11_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_2_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_0_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_2_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_1_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_10_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_2_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_10_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_3_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_21_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_4_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_21_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_5_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_48_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_14_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_48_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_15_L001_R2_001.fastq.gz
- + q2_dada2/tests/data/sample_seqs_paired/BLANK_20_L001_R1_001.fastq.gz
- + q2_dada2/tests/data/sample_seqs_paired/BLANK_21_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/MANIFEST
- q2_dada2/tests/data/sample_seqs_paired/PAP130.2_22_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/PAP130.2_6_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/PAP130.2_22_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/PAP130.2_7_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_49_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_16_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_49_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_17_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_31_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_8_L001_R1_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_31_L001_R2_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_9_L001_R2_001.fastq.gz
- q2_dada2/tests/data/sample_seqs_paired/YUN1242.3_44_L001_R1_001.fastq.gz → q2_dada2/tests/data/sample_seqs_paired/YUN1242.3_12_L001_R1_001.fastq.gz


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/q2-dada2/-/commit/e95c33e9c5f10f80a30bbb689d3826152235e2d3

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