[med-svn] [Git][med-team/q2-emperor][master] 6 commits: Autopkgtest for all supported Python3 versions

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / q2-emperor


Commits:
97cbc8be by Andreas Tille at 2024-02-18T13:05:30+01:00
Autopkgtest for all supported Python3 versions

- - - - -
3326c3a9 by Andreas Tille at 2024-02-18T14:29:34+01:00
New upstream version 2024.2.0
- - - - -
8aafebac by Andreas Tille at 2024-02-18T14:29:34+01:00
routine-update: New upstream version

- - - - -
3f69f77c by Andreas Tille at 2024-02-18T14:29:34+01:00
Update upstream source from tag 'upstream/2024.2.0'

Update to upstream version '2024.2.0'
with Debian dir bdee3069c1ad7786f4a3ebeb6180c729ad334626
- - - - -
3597679c by Andreas Tille at 2024-02-18T14:29:52+01:00
routine-update: Regenerate debian/control from debian/control.in

- - - - -
c59044fc by Andreas Tille at 2024-02-18T14:31:26+01:00
routine-update: Ready to upload to unstable

- - - - -


8 changed files:

- .github/workflows/ci-dev.yaml
- README.md
- ci/recipe/meta.yaml
- debian/changelog
- debian/control
- debian/tests/control
- debian/tests/run-unit-test
- q2_emperor/_version.py


Changes:

=====================================
.github/workflows/ci-dev.yaml
=====================================
@@ -9,4 +9,4 @@ jobs:
   ci:
     uses: qiime2/distributions/.github/workflows/lib-ci-dev.yaml at dev
     with:
-      distro: core
\ No newline at end of file
+      distro: amplicon


=====================================
README.md
=====================================
@@ -1,5 +1,5 @@
 # q2-emperor
 
-![](https://github.com/qiime2/q2-emperor/workflows/ci/badge.svg)
+![](https://github.com/qiime2/q2-emperor/workflows/ci-dev/badge.svg)
 
 This is a QIIME 2 plugin. For details on QIIME 2, see https://qiime2.org.
\ No newline at end of file


=====================================
ci/recipe/meta.yaml
=====================================
@@ -21,7 +21,7 @@ requirements:
     - numpy
     - pandas {{ pandas }}
     - scikit-bio {{ scikit_bio }}
-    - emperor ==1.0.3
+    - emperor ==1.0.4
     - qiime2 {{ qiime2_epoch }}.*
     - q2templates {{ qiime2_epoch }}.*
     - q2-types {{ qiime2_epoch }}.*


=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+q2-emperor (2024.2.0-1) unstable; urgency=medium
+
+  * Team upload.
+  * New upstream version
+  * Autopkgtest for all supported Python3 versions
+  * Regenerate debian/control from debian/control.in (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Sun, 18 Feb 2024 14:29:52 +0100
+
 q2-emperor (2023.9.0-1) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -12,9 +12,9 @@ Build-Depends: debhelper-compat (= 13),
                python3-pytest <!nocheck>,
                python3-pytest-cov <!nocheck>,
                python3-emperor <!nocheck>,
-               qiime (>= 2023.9) <!nocheck>,
-               q2templates (>= 2023.9) <!nocheck>,
-               q2-types (>= 2023.9) <!nocheck>
+               qiime (>= 2024.2) <!nocheck>,
+               q2templates (>= 2024.2) <!nocheck>,
+               q2-types (>= 2024.2) <!nocheck>
 Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/q2-emperor
 Vcs-Git: https://salsa.debian.org/med-team/q2-emperor.git
@@ -29,9 +29,9 @@ Depends: ${shlibs:Depends},
          python3-pandas,
          python3-emperor,
          python3-distutils,
-         q2templates (>= 2023.9),
-         q2-types (>= 2023.9),
-         qiime (>= 2023.9)
+         q2templates (>= 2024.2),
+         q2-types (>= 2024.2),
+         qiime (>= 2024.2)
 Description: QIIME2 plugin for display of ordination plots
  QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
  package with a focus on data and analysis transparency. QIIME 2 enables


=====================================
debian/tests/control
=====================================
@@ -1,3 +1,3 @@
 Tests: run-unit-test
-Depends: @, python3-pytest
+Depends: @, python3-pytest, python3-all
 Restrictions: allow-stderr, skip-not-installable


=====================================
debian/tests/run-unit-test
=====================================
@@ -18,4 +18,7 @@ if [ ! -e /usr/bin/py.test-3 ] ; then
 fi
 
 # Run build-time tests
-py.test-3
+for py in $(py3versions -s 2> /dev/null)
+do
+    ${py} -m pytest -v  --cov=${pkg}
+done


=====================================
q2_emperor/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
     # setup.py/versioneer.py will grep for the variable names, so they must
     # each be defined on a line of their own. _version.py will just call
     # get_keywords().
-    git_refnames = " (tag: 2023.9.0, Release-2023.9)"
-    git_full = "f60a1cb418f04e8318daef4afeded4f55f0ea77c"
-    git_date = "2023-10-03 21:56:29 +0000"
+    git_refnames = " (tag: 2024.2.0, Release-2024.2)"
+    git_full = "8c5ab8122280eaafcb8b313deebcb81551b96119"
+    git_date = "2024-02-16 21:57:08 +0000"
     keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
     return keywords
 



View it on GitLab: https://salsa.debian.org/med-team/q2-emperor/-/compare/9a9f4ab9354ae0dab797acf77aff206da5c71ab2...c59044fc48a991435d402b3cf5e683f3c876d708

-- 
View it on GitLab: https://salsa.debian.org/med-team/q2-emperor/-/compare/9a9f4ab9354ae0dab797acf77aff206da5c71ab2...c59044fc48a991435d402b3cf5e683f3c876d708
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