[med-svn] [Git][med-team/snakemake][main] 4 commits: New upstream version 8.2.3

[Rebecca N. Palmer (@rnpalmer-guest)]

Rebecca N. Palmer pushed to branch main at Debian Med / snakemake


Commits:
cc1b5000 by Rebecca N. Palmer at 2024-01-20T10:42:31+00:00
New upstream version 8.2.3
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df33957e by Rebecca N. Palmer at 2024-01-20T10:42:57+00:00
Update upstream source from tag 'upstream/8.2.3'

Update to upstream version '8.2.3'
with Debian dir 65b136a886b2775525b212ae981b748e27e5ddeb
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df264c14 by Rebecca N. Palmer at 2024-01-20T10:48:06+00:00
Update d/copyright.

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55f94e32 by Rebecca N. Palmer at 2024-01-20T11:23:40+00:00
Drop / refresh patches.

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30 changed files:

- .github/workflows/docker-publish.yml
- .github/workflows/main.yml
- .github/workflows/release-please.yml
- − .github/workflows/test-flux.yaml
- .gitignore
- .readthedocs.yml
- .sonarcloud.properties
- + .test_durations
- CHANGELOG.md
- CODE_OF_CONDUCT.md
- Dockerfile
- LICENSE.md
- README.md
- + apidocs/.readthedocs.yaml
- + apidocs/Makefile
- + apidocs/_templates/module_template.rst
- + apidocs/api_reference/internal/modules.rst
- + apidocs/api_reference/snakemake_api.rst
- docs/apidocs/api_reference/snakemake_utils.rst → apidocs/api_reference/snakemake_utils.rst
- docs/apidocs/conf.py → apidocs/conf.py
- docs/apidocs/index.rst → apidocs/index.rst
- + apidocs/requirements.txt
- debian/changelog
- debian/copyright
- debian/patches/0008-remove_sphinx.ext.patch
- debian/patches/0009-skip-test-without-google-cloud-sdk.patch
- debian/patches/cirumvent-retry.patch
- debian/patches/fix_test_pytest.patch
- debian/patches/local_javascript.patch
- debian/patches/python2to3.patch


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/e9738685adcd7d823116f63ae652faa371c7254f...55f94e3207eab69f40c2bdb7a294ce5f96248fa7

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/e9738685adcd7d823116f63ae652faa371c7254f...55f94e3207eab69f40c2bdb7a294ce5f96248fa7
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