[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Jan 28 01:43:00 GMT 2024



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
218fd65f by Andreas Tille at 2024-01-28T01:42:51+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,12 +1,12 @@
-Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
+Last-Update: Sun, 28 Jan 2024 01:42:05 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
  dicomscope                    |     39 | {imaging}                                  | 
  mrtrix3                       |     14 | {imaging}                                  | 
- oscar                         |     14 | {data,tools,practice}                      | 
+ oscar                         |     14 | {practice,data,tools}                      | 
  king                          |     12 | {imaging,typesetting}                      | 
- gnumed-server                 |     11 | {covid-19,practice}                        | 
+ gnumed-server                 |     11 | {practice,covid-19}                        | 
  biojava-live                  |     10 | {bio-dev}                                  | 
  pixelmed                      |      9 | {imaging}                                  | 
  adun.app                      |      8 | {bio}                                      | 
@@ -24,25 +24,25 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  ghmm                          |      4 | {bio}                                      | 
  jebl2                         |      4 | {bio-dev}                                  | 
  librdp-taxonomy-tree-java     |      4 | {bio-dev}                                  | 
- phyutility                    |      4 | {bio,cloud}                                | 
+ phyutility                    |      4 | {cloud,bio}                                | 
  piler                         |      4 | {bio}                                      | 
- proalign                      |      4 | {bio-phylogeny,bio}                        | 
+ proalign                      |      4 | {bio,bio-phylogeny}                        | 
  rdp-classifier                |      4 | {bio}                                      | 
- sibsim4                       |      4 | {bio,cloud}                                | 
+ sibsim4                       |      4 | {cloud,bio}                                | 
  staden                        |      4 | {bio}                                      | 
- anfo                          |      3 | {cloud,bio}                                | 
- arden                         |      3 | {bio,cloud}                                | 
+ anfo                          |      3 | {bio,cloud}                                | 
+ arden                         |      3 | {cloud,bio}                                | 
  brig                          |      3 | {bio}                                      | 
- dextractor                    |      3 | {bio,covid-19}                             | 
+ dextractor                    |      3 | {covid-19,bio}                             | 
  embassy-domainatrix           |      3 | {bio,cloud}                                | 
- embassy-domsearch             |      3 | {bio,cloud}                                | 
+ embassy-domsearch             |      3 | {cloud,bio}                                | 
  placnet                       |      3 | {bio}                                      | 
- rtax                          |      3 | {cloud,bio}                                | 
+ rtax                          |      3 | {bio,cloud}                                | 
  sortmerna                     |      3 | {bio}                                      | 
- spread-phy                    |      3 | {bio-phylogeny,bio}                        | 
+ spread-phy                    |      3 | {bio,bio-phylogeny}                        | 
  beast-mcmc                    |      2 | {bio-phylogeny,bio}                        | 
  bitseq                        |      2 | {bio}                                      | 
- clonalframeml                 |      2 | {bio,covid-19}                             | 
+ clonalframeml                 |      2 | {covid-19,bio}                             | 
  fastml                        |      2 | {bio}                                      | 
  getdata                       |      2 | {bio}                                      | 
  hinge                         |      2 | {bio}                                      | 
@@ -70,7 +70,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  sprai                         |      2 | {bio}                                      | 
  suitename                     |      2 | {bio}                                      | 
  surankco                      |      2 | {bio}                                      | 
- thesias                       |      2 | {covid-19,bio}                             | 
+ thesias                       |      2 | {bio,covid-19}                             | 
  tracetuner                    |      2 | {bio}                                      | 
  acedb                         |      1 | {cloud,bio}                                | 
  biojava6-live                 |      1 | {bio-dev}                                  | 
@@ -85,14 +85,14 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  libmialm                      |      1 | {imaging-dev}                              | 
  librg-utils-perl              |      1 | {bio}                                      | 
  libxdf                        |      1 | {imaging-dev}                              | 
- pigx-rnaseq                   |      1 | {bio,covid-19}                             | 
- plasmidid                     |      1 | {bio,covid-19}                             | 
+ pigx-rnaseq                   |      1 | {covid-19,bio}                             | 
+ plasmidid                     |      1 | {covid-19,bio}                             | 
  pplacer                       |      1 | {covid-19,bio,bio-phylogeny}               | 
  pymia                         |      1 | {imaging-dev}                              | 
  seq-gen                       |      1 | {bio}                                      | 
  sift                          |      1 | {bio}                                      | 
  skesa                         |      1 | {bio}                                      | 
- tophat-recondition            |      1 | {bio,covid-19}                             | 
+ tophat-recondition            |      1 | {covid-19,bio}                             | 
  varscan                       |      1 | {covid-19,bio}                             | 
  bambamc                       |      0 | {bio-dev}                                  | 
  biosyntax                     |      0 | {bio}                                      | 
@@ -107,7 +107,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  elastix                       |      0 | {imaging}                                  | 
  fis-gtm                       |      0 | {his}                                      | 
  gatk-bwamem                   |      0 | {bio-dev}                                  | 
- htscodecs                     |      0 | {covid-19,bio-dev}                         | 
+ htscodecs                     |      0 | {bio-dev,covid-19}                         | 
  insighttoolkit5               |      0 | {imaging-dev}                              | 
  libbioparser-dev              |      0 | {bio-dev}                                  | 
  libbiosoup-dev                |      0 | {bio-dev}                                  | 
@@ -120,7 +120,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  libchado-perl                 |      0 | {bio-dev}                                  | 
  libgkarrays                   |      0 | {bio-dev}                                  | 
  libhmsbeagle                  |      0 | {bio-dev}                                  | 
- libics                        |      0 | {covid-19,imaging-dev}                     | 
+ libics                        |      0 | {imaging-dev,covid-19}                     | 
  libjloda-java                 |      0 | {bio-dev}                                  | 
  libmems                       |      0 | {bio-dev}                                  | 
  libmuscle                     |      0 | {bio-dev}                                  | 
@@ -136,7 +136,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  metastudent-data              |      0 | {bio}                                      | 
  metastudent-data-2            |      0 | {bio}                                      | 
  mia                           |      0 | {imaging-dev}                              | 
- milib                         |      0 | {covid-19,bio-dev}                         | 
+ milib                         |      0 | {bio-dev,covid-19}                         | 
  ncbi-igblast                  |      0 | {bio}                                      | 
  ncbi-vdb                      |      0 | {bio-dev}                                  | 
  opencfu                       |      0 | {laboratory}                               | 
@@ -146,19 +146,19 @@ Last-Update: Sat, 27 Jan 2024 13:43:23 +0000
  provean                       |      0 | {bio}                                      | 
  python-cgelib                 |      0 | {bio-dev}                                  | 
  python-seqcluster             |      0 | {bio}                                      | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                         | 
+ python-seqcluster             |      0 | {bio-dev,covid-19}                         | 
  resfinder-db                  |      0 | {bio}                                      | 
  savvy                         |      0 | {bio-dev}                                  | 
  savvy                         |      0 | {bio}                                      | 
  sbmltoolbox                   |      0 | {bio-dev}                                  | 
  sight                         |      0 | {imaging-dev}                              | 
- smrtanalysis                  |      0 | {covid-19,bio}                             | 
+ smrtanalysis                  |      0 | {bio,covid-19}                             | 
  srf                           |      0 | {bio-dev}                                  | 
  surpyvor                      |      0 | {bio}                                      | 
  terraphast                    |      0 | {bio}                                      | 
- tipp                          |      0 | {covid-19,bio}                             | 
+ tipp                          |      0 | {bio,covid-19}                             | 
  trace2dbest                   |      0 | {bio}                                      | 
- vienna-rna                    |      0 | {bio,covid-19}                             | 
+ vienna-rna                    |      0 | {covid-19,bio}                             | 
  xdffileio                     |      0 | {imaging-dev}                              | 
  xxsds-dynamic                 |      0 | {bio-dev}                                  | 
  gatk-fermilite                |     -1 | {bio-dev}                                  | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,18 +1,18 @@
-Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
+Last-Update: Sun, 28 Jan 2024 01:42:08 +0000
 
        Source                              | Vote   |             Tasks                                                   |                              Tags                               
 -------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------------------
  gts                                       |   4535 | {viewing}                                                           | 
  nltk                                      |   2299 | {linguistics}                                                       | 
  opencascade                               |    594 | {simulations}                                                       | 
- suitesparse                               |    205 | {mathematics-dev,numericalcomputation}                              | 
+ suitesparse                               |    205 | {numericalcomputation,mathematics-dev}                              | 
  spacenavd                                 |    166 | {tools}                                                             | 
  armadillo                                 |    152 | {mathematics-dev}                                                   | 
  python-pyqtgraph                          |    144 | {viewing}                                                           | 
  arpack                                    |     74 | {mathematics-dev}                                                   | 
  atlas                                     |     60 | {mathematics-dev}                                                   | 
  imview                                    |     47 | {viewing}                                                           | 
- fftw                                      |     37 | {mathematics-dev,meteorology-dev,physics-dev}                       | 
+ fftw                                      |     37 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
  ntl                                       |     37 | {mathematics-dev}                                                   | 
  arduino-mk                                |     36 | {robotics}                                                          | 
  libm4ri                                   |     30 | {mathematics-dev}                                                   | 
@@ -23,7 +23,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  matlab-support                            |     22 | {numericalcomputation,mathematics}                                  | 
  ppl                                       |     22 | {numericalcomputation}                                              | 
  gts                                       |     21 | {viewing-dev}                                                       | 
- flann                                     |     20 | {engineering-dev,mathematics-dev}                                   | 
+ flann                                     |     20 | {mathematics-dev,engineering-dev}                                   | 
  sketch                                    |     19 | {typesetting}                                                       | 
  bossa                                     |     18 | {devices}                                                           | 
  cliquer                                   |     18 | {mathematics}                                                       | 
@@ -32,15 +32,15 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  ros-ros-environment                       |     17 | {robotics-dev}                                                      | 
  setzer                                    |     16 | {typesetting}                                                       | 
  dune-uggrid                               |     15 | {mathematics-dev}                                                   | 
- fftw                                      |     15 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
+ fftw                                      |     15 | {physics-dev,meteorology-dev,mathematics-dev}                       | 
  libhomfly                                 |     15 | {mathematics-dev}                                                   | 
  lrcalc                                    |     15 | {mathematics-dev}                                                   | 
- rubiks                                    |     15 | {geometry,mathematics}                                              | 
+ rubiks                                    |     15 | {mathematics,geometry}                                              | 
  libitpp                                   |     14 | {engineering-dev,mathematics-dev}                                   | 
  libm4rie                                  |     14 | {mathematics-dev}                                                   | 
- guiqwt                                    |     13 | {numericalcomputation,viewing}                                      | 
+ guiqwt                                    |     13 | {viewing,numericalcomputation}                                      | 
  ros-rosconsole                            |     13 | {robotics-dev}                                                      | 
- coinor-symphony                           |     12 | {mathematics,numericalcomputation,logic}                            | 
+ coinor-symphony                           |     12 | {logic,mathematics,numericalcomputation}                            | 
  gf2x                                      |     12 | {mathematics-dev}                                                   | 
  iml                                       |     12 | {mathematics-dev}                                                   | 
  libzn-poly                                |     12 | {mathematics-dev}                                                   | 
@@ -54,29 +54,29 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  ros-vcstool                               |      9 | {robotics-dev}                                                      | 
  urdfdom-headers                           |      9 | {robotics-dev}                                                      | 
  alberta                                   |      8 | {engineering-dev}                                                   | 
- debian-science                            |      8 | {physics,machine-learning,mathematics,nanoscale-physics,economics}  | 
+ debian-science                            |      8 | {mathematics,economics,physics,machine-learning,nanoscale-physics}  | 
  feff85exafs                               |      8 | {chemistry}                                                         | 
  geg                                       |      8 | {viewing}                                                           | 
  apophenia                                 |      7 | {statistics}                                                        | 
  coda                                      |      7 | {meteorology}                                                       | 
  dune-istl                                 |      7 | {mathematics-dev}                                                   | 
- etsf-io                                   |      7 | {physics,nanoscale-physics}                                         | 
+ etsf-io                                   |      7 | {nanoscale-physics,physics}                                         | 
  hpcc                                      |      7 | {numericalcomputation,distributedcomputing}                         | 
  muparser                                  |      7 | {mathematics-dev}                                                   | 
  pcl                                       |      7 | {robotics-dev}                                                      | 
  dxsamples                                 |      6 | {nanoscale-physics}                                                 | 
  form                                      |      6 | {mathematics}                                                       | 
  ipe-tools                                 |      6 | {typesetting}                                                       | 
- toulbar2                                  |      6 | {mathematics,numericalcomputation,logic,physics}                    | 
+ toulbar2                                  |      6 | {logic,mathematics,physics,numericalcomputation}                    | 
  coinmp                                    |      5 | {mathematics-dev,numericalcomputation,logic}                        | 
+ debian-science                            |      5 | {nanoscale-physics,physics,economics,machine-learning}              | 
+ debian-science                            |      5 | {economics,physics,statistics,nanoscale-physics}                    | 
  debian-science                            |      5 | {neuroscience-cognitive,machine-learning}                           | 
- debian-science                            |      5 | {economics,nanoscale-physics,machine-learning,physics}              | 
- debian-science                            |      5 | {physics,nanoscale-physics,statistics,economics}                    | 
  dune-localfunctions                       |      5 | {mathematics-dev}                                                   | 
  libcgns                                   |      5 | {engineering}                                                       | 
  libmatheval                               |      5 | {mathematics}                                                       | 
- libvigraimpex                             |      5 | {machine-learning,imageanalysis-dev}                                | 
- persalys                                  |      5 | {mathematics,engineering,statistics}                                | 
+ libvigraimpex                             |      5 | {imageanalysis-dev,machine-learning}                                | 
+ persalys                                  |      5 | {statistics,mathematics,engineering}                                | 
  psurface                                  |      5 | {numericalcomputation}                                              | 
  qd                                        |      5 | {mathematics-dev}                                                   | 
  qwtplot3d                                 |      5 | {viewing-dev}                                                       | 
@@ -91,7 +91,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  liblbfgs                                  |      4 | {mathematics-dev}                                                   | 
  libmatheval                               |      4 | {mathematics-dev}                                                   | 
  opencascade                               |      4 | {simulations}                                                       | 
- persalys                                  |      4 | {mathematics,engineering,statistics}                                | 
+ persalys                                  |      4 | {engineering,mathematics,statistics}                                | 
  polylib                                   |      4 | {mathematics}                                                       | 
  toontag                                   |      4 | {numericalcomputation}                                              | 
  uctodata                                  |      4 | {linguistics}                                                       | 
@@ -99,14 +99,14 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  apriltag                                  |      3 | {robotics-dev}                                                      | 
  clhep                                     |      3 | {highenergy-physics-dev}                                            | 
  coda                                      |      3 | {meteorology-dev}                                                   | 
- code-saturne                              |      3 | {mathematics-dev,engineering-dev}                                   | 
+ code-saturne                              |      3 | {engineering-dev,mathematics-dev}                                   | 
  debian-science                            |      3 | {psychophysics}                                                     | 
  debian-science                            |      3 | {tools}                                                             | 
  dune-functions                            |      3 | {mathematics-dev}                                                   | 
  dune-typetree                             |      3 | {mathematics-dev}                                                   | 
  dxflib                                    |      3 | {engineering-dev}                                                   | 
  itsol                                     |      3 | {mathematics-dev}                                                   | 
- libvigraimpex                             |      3 | {machine-learning,imageanalysis-dev}                                | 
+ libvigraimpex                             |      3 | {imageanalysis-dev,machine-learning}                                | 
  libxsmm                                   |      3 | {mathematics-dev}                                                   | 
  lrcalc                                    |      3 | {mathematics}                                                       | 
  metis-edf                                 |      3 | {numericalcomputation,engineering}                                  | 
@@ -115,7 +115,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  ompl                                      |      3 | {robotics-dev}                                                      | 
  openigtlink                               |      3 | {robotics-dev}                                                      | 
  openstereogram                            |      3 | {tools}                                                             | 
- python-escript                            |      3 | {engineering,numericalcomputation,simulations}                      | 
+ python-escript                            |      3 | {simulations,engineering,numericalcomputation}                      | 
  rheolef                                   |      3 | {mathematics}                                                       | 
  robot-testing-framework                   |      3 | {robotics-dev}                                                      | 
  ros-opencv-apps                           |      3 | {robotics}                                                          | 
@@ -142,7 +142,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  sac2mseed                                 |      2 | {geography}                                                         | 
  scram                                     |      2 | {engineering}                                                       | 
  sparskit                                  |      2 | {mathematics-dev}                                                   | 
- spfft                                     |      2 | {physics-dev,meteorology-dev,nanoscale-physics-dev,mathematics-dev} | 
+ spfft                                     |      2 | {physics-dev,mathematics-dev,nanoscale-physics-dev,meteorology-dev} | 
  ssm                                       |      2 | {nanoscale-physics-dev}                                             | 
  ufo-core                                  |      2 | {nanoscale-physics-dev}                                             | 
  veccore                                   |      2 | {mathematics-dev}                                                   | 
@@ -160,19 +160,19 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  frog                                      |      1 | {linguistics}                                                       | 
  frogdata                                  |      1 | {linguistics}                                                       | 
  harp                                      |      1 | {meteorology}                                                       | 
- hepmc3                                    |      1 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
+ hepmc3                                    |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  libccp4                                   |      1 | {nanoscale-physics-dev}                                             | 
  libcvd                                    |      1 | {imageanalysis}                                                     | 
  libcvd                                    |      1 | {imageanalysis-dev}                                                 | 
  mpi4py-fft                                |      1 | {mathematics-dev}                                                   | 
  mseed2sac                                 |      1 | {dataacquisition-dev}                                               | 
- ncrystal                                  |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ ncrystal                                  |      1 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  openctm                                   |      1 | {physics-dev}                                                       | 
  ortools                                   |      1 | {mathematics-dev}                                                   | 
  python-aws-xray-sdk                       |      1 | {dataacquisition-dev}                                               | 
  ros-collada-urdf                          |      1 | {robotics}                                                          | 
  sardana                                   |      1 | {dataacquisition}                                                   | 
- schroedinger-coordgenlibs                 |      1 | {chemistry,nanoscale-physics-dev}                                   | 
+ schroedinger-coordgenlibs                 |      1 | {nanoscale-physics-dev,chemistry}                                   | 
  sdpb                                      |      1 | {highenergy-physics,numericalcomputation}                           | 
  siscone                                   |      1 | {highenergy-physics-dev}                                            | 
  taurus                                    |      1 | {dataacquisition}                                                   | 
@@ -191,7 +191,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  apertium-swe-dan                          |      0 | {linguistics}                                                       | 
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
- calculix-ccx-doc                          |      0 | {numericalcomputation,simulations,engineering}                      | 
+ calculix-ccx-doc                          |      0 | {numericalcomputation,engineering,simulations}                      | 
  calculix-ccx-test                         |      0 | {engineering,simulations,numericalcomputation}                      | 
  ckon                                      |      0 | {highenergy-physics-dev}                                            | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
@@ -223,7 +223,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  openmx                                    |      0 | {nanoscale-physics,physics}                                         | 
  ortools                                   |      0 | {mathematics-dev}                                                   | 
  psurface                                  |      0 | {numericalcomputation}                                              | 
- python-escript                            |      0 | {engineering,simulations,numericalcomputation}                      | 
+ python-escript                            |      0 | {simulations,engineering,numericalcomputation}                      | 
  python-opcodes                            |      0 | {tools}                                                             | 
  qrupdate                                  |      0 | {mathematics-dev}                                                   | 
  refmac-dictionary                         |      0 | {chemistry,highenergy-physics-dev}                                  | 
@@ -244,7 +244,7 @@ Last-Update: Sat, 27 Jan 2024 13:43:26 +0000
  ticcutils                                 |      0 | {linguistics}                                                       | 
  timbl                                     |      0 | {linguistics}                                                       | 
  timblserver                               |      0 | {linguistics}                                                       | 
- trilinos                                  |      0 | {mathematics-dev,engineering-dev,physics-dev}                       | 
+ trilinos                                  |      0 | {physics-dev,mathematics-dev,engineering-dev}                       | 
  ucto                                      |      0 | {linguistics}                                                       | 
  ufo-filters                               |      0 | {nanoscale-physics-dev}                                             | 
  vecgeom                                   |      0 | {nanoscale-physics-dev}                                             | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 27 Jan 2024 13:43:29 +0000
+Last-Update: Sun, 28 Jan 2024 01:42:11 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/218fd65f55946099469666646ff4041ba373a554

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