[med-svn] [Git][med-team/q2-fragment-insertion][master] 7 commits: Generate debian/control automatically to refresh version number
Andreas Tille (@tille)
gitlab at salsa.debian.org
Tue Jan 30 16:46:06 GMT 2024
Andreas Tille pushed to branch master at Debian Med / q2-fragment-insertion
Commits:
0d35adb2 by Andreas Tille at 2024-01-30T17:41:34+01:00
Generate debian/control automatically to refresh version number
- - - - -
39820418 by Andreas Tille at 2024-01-30T17:41:49+01:00
New upstream version 2023.9.0
- - - - -
7e364c4a by Andreas Tille at 2024-01-30T17:41:49+01:00
routine-update: New upstream version
- - - - -
0ea209f7 by Andreas Tille at 2024-01-30T17:41:49+01:00
Update upstream source from tag 'upstream/2023.9.0'
Update to upstream version '2023.9.0'
with Debian dir d0ff312c8c267b07b1c5e91dc46e1c41b3b49549
- - - - -
75c8d1c2 by Andreas Tille at 2024-01-30T17:41:53+01:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/
- - - - -
7ea1d2d0 by Andreas Tille at 2024-01-30T17:42:15+01:00
routine-update: Regenerate debian/control from debian/control.in
- - - - -
b27b52cd by Andreas Tille at 2024-01-30T17:44:48+01:00
routine-update: Ready to upload to unstable
- - - - -
5 changed files:
- debian/changelog
- debian/control
- + debian/control.in
- debian/rules
- q2_fragment_insertion/_version.py
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+q2-fragment-insertion (2023.9.0-1) unstable; urgency=medium
+
+ * Team upload.
+ * New upstream version
+ * Generate debian/control automatically to refresh version number
+ * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
+ * Regenerate debian/control from debian/control.in (routine-update)
+
+ -- Andreas Tille <tille at debian.org> Tue, 30 Jan 2024 17:42:16 +0100
+
q2-fragment-insertion (2023.7.0-2) UNRELEASED; urgency=medium
* d/salsa-ci.yml: skip test on i386.
=====================================
debian/control
=====================================
@@ -1,3 +1,4 @@
+# This file is autogenerated from control.in to update versioned dependencies
Source: q2-fragment-insertion
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller at debian.org>,
@@ -5,10 +6,10 @@ Uploaders: Steffen Moeller <moeller at debian.org>,
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
- dh-python,
+ dh-sequence-python3,
python3,
python3-setuptools,
- qiime (>= 2022.11.1),
+ qiime (>= 2023.9),
python3-pytest <!nocheck>,
python3-pytest-cov <!nocheck>,
python3-biom-format <!nocheck>,
@@ -26,8 +27,8 @@ Depends: ${shlibs:Depends},
${python3:Depends},
python3-biom-format,
python3-skbio,
- qiime (>= 2022.11.1),
- q2-types (>= 2022.11.1)
+ qiime (>= 2023.9),
+ q2-types (>= 2023.9)
Recommends: sepp,
python3-ijson,
default-jdk
=====================================
debian/control.in
=====================================
@@ -0,0 +1,55 @@
+Source: q2-fragment-insertion
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>,
+ Étienne Mollier <emollier at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper-compat (= 13),
+ dh-sequence-python3,
+ python3,
+ python3-setuptools,
+ qiime (>= @DEB_VERSION_UPSTREAM@),
+ python3-pytest <!nocheck>,
+ python3-pytest-cov <!nocheck>,
+ python3-biom-format <!nocheck>,
+ python3-skbio <!nocheck>
+Standards-Version: 4.6.2
+Vcs-Browser: https://salsa.debian.org/med-team/q2-fragment-insertion
+Vcs-Git: https://salsa.debian.org/med-team/q2-fragment-insertion.git
+Homepage: https://qiime2.org/
+Rules-Requires-Root: no
+
+Package: q2-fragment-insertion
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python3:Depends},
+ python3-biom-format,
+ python3-skbio,
+ qiime (>= @DEB_VERSION_UPSTREAM@),
+ q2-types (>= @DEB_VERSION_UPSTREAM@)
+Recommends: sepp,
+ python3-ijson,
+ default-jdk
+Description: QIIME 2 plugin for fragment insertion
+ QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
+ package with a focus on data and analysis transparency. QIIME 2 enables
+ researchers to start an analysis with raw DNA sequence data and finish with
+ publication-quality figures and statistical results.
+ Key features:
+ * Integrated and automatic tracking of data provenance
+ * Semantic type system
+ * Plugin system for extending microbiome analysis functionality
+ * Support for multiple types of user interfaces (e.g. API, command line,
+ graphical)
+ .
+ QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
+ pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
+ retaining the features that makes QIIME 1 a powerful and widely-used analysis
+ pipeline.
+ .
+ QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
+ New functionality will regularly become available through QIIME 2 plugins. You
+ can view a list of plugins that are currently available on the QIIME 2 plugin
+ availability page. The future plugins page lists plugins that are being
+ developed.
=====================================
debian/rules
=====================================
@@ -9,8 +9,15 @@ export PYBUILD_BEFORE_TEST=python{version} setup.py develop --install-dir {build
export PYBUILD_BEFORE_INSTALL=rm -rvf {build_dir}/q2-fragment-insertion.egg-* {build_dir}/site.py \
{build_dir}/.coverage* {build_dir}/easy-install.pth
+include /usr/share/dpkg/default.mk
+VERSION_UPSTREAM=$(shell echo $(DEB_VERSION_UPSTREAM) | sed -e 's/\(20[0-9][0-9]\.[0-9]\+\)\..*/\1/')
+
+debian/control: debian/control.in
+ echo "# This file is autogenerated from control.in to update versioned dependencies" > $@
+ sed -e"s/@DEB_VERSION_UPSTREAM@/$(VERSION_UPSTREAM)/g" $< >> $@
+
%:
- dh $@ --with python3 --buildsystem=pybuild
+ dh $@ --buildsystem=pybuild
# FIXME: similarly to the qiime package, the build time testing fails, as the
# Qiime plugin system is not fully available at this point of the package
=====================================
q2_fragment_insertion/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
- git_refnames = " (tag: 2023.7.0, Release-2023.7)"
- git_full = "f9117bae1742c47d7b96e6b2c4a385dca8d133c1"
- git_date = "2023-08-17 18:44:05 +0000"
+ git_refnames = " (tag: 2023.9.0, Release-2023.9)"
+ git_full = "998a8dde8ea556003f002eae8c5e6527e132cb81"
+ git_date = "2023-10-03 21:58:49 +0000"
keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
return keywords
View it on GitLab: https://salsa.debian.org/med-team/q2-fragment-insertion/-/compare/32abbbf829d2b23f6777e776707e2ed3a2d5967c...b27b52cd479dc2db705e05bcc9036dcddcc92870
--
View it on GitLab: https://salsa.debian.org/med-team/q2-fragment-insertion/-/compare/32abbbf829d2b23f6777e776707e2ed3a2d5967c...b27b52cd479dc2db705e05bcc9036dcddcc92870
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20240130/33739d7b/attachment-0001.htm>
More information about the debian-med-commit
mailing list