[med-svn] [Git][med-team/q2-metadata][master] 7 commits: Generate debian/control automatically to refresh version number
Andreas Tille (@tille)
gitlab at salsa.debian.org
Tue Jan 30 18:51:01 GMT 2024
Andreas Tille pushed to branch master at Debian Med / q2-metadata
Commits:
8d6b4105 by Andreas Tille at 2024-01-30T19:47:13+01:00
Generate debian/control automatically to refresh version number
- - - - -
236d337c by Andreas Tille at 2024-01-30T19:47:28+01:00
routine-update: New upstream version
- - - - -
050f3ffd by Andreas Tille at 2024-01-30T19:47:29+01:00
New upstream version 2023.9.0+dfsg
- - - - -
0327270c by Andreas Tille at 2024-01-30T19:47:29+01:00
Update upstream source from tag 'upstream/2023.9.0+dfsg'
Update to upstream version '2023.9.0+dfsg'
with Debian dir 59668d0a540c291af887e7c03692c28e17e441d5
- - - - -
8d41fdd2 by Andreas Tille at 2024-01-30T19:47:32+01:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/
- - - - -
455ed39f by Andreas Tille at 2024-01-30T19:47:51+01:00
routine-update: Regenerate debian/control from debian/control.in
- - - - -
c12f8dd8 by Andreas Tille at 2024-01-30T19:50:25+01:00
routine-update: Ready to upload to unstable
- - - - -
5 changed files:
- debian/changelog
- debian/control
- + debian/control.in
- debian/rules
- q2_metadata/_version.py
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+q2-metadata (2023.9.0+dfsg-1) unstable; urgency=medium
+
+ * Team upload.
+ * New upstream version
+ * Generate debian/control automatically to refresh version number
+ * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
+ * Regenerate debian/control from debian/control.in (routine-update)
+
+ -- Andreas Tille <tille at debian.org> Tue, 30 Jan 2024 19:47:51 +0100
+
q2-metadata (2023.7.0+dfsg-2) unstable; urgency=medium
* d/control: depend on q2-types (>= 2023.7.0).
=====================================
debian/control
=====================================
@@ -1,3 +1,4 @@
+# This file is autogenerated from control.in to update versioned dependencies
Source: q2-metadata
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Liubov Chuprikova <chuprikovalv at gmail.com>,
@@ -6,17 +7,17 @@ Uploaders: Liubov Chuprikova <chuprikovalv at gmail.com>,
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
- dh-python,
+ dh-sequence-python3,
python3,
python3-setuptools,
python3-pytest-cov,
python3-pandas,
python3-skbio (>= 0.5.8-2exp1~),
libjs-jquery-datatables,
- qiime (>= 2022.11.1),
- q2templates (>= 2022.11.1),
- q2-quality-filter (>= 2022.11.1),
- q2-types (>= 2023.7.0)
+ qiime (>= 2023.9),
+ q2templates (>= 2023.9),
+ q2-quality-filter (>= 2023.9),
+ q2-types (>= 2023.9)
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/q2-metadata
Vcs-Git: https://salsa.debian.org/med-team/q2-metadata.git
@@ -34,9 +35,9 @@ Depends: ${shlibs:Depends},
python3-skbio (>= 0.5.8-2exp1~),
libjs-jquery-datatables,
qiime (>= 2022.11.1),
- q2templates (>= 2022.11.1),
- q2-quality-filter (>= 2022.11.1),
- q2-types (>= 2023.7.0)
+ q2templates (>= 2023.9),
+ q2-quality-filter (>= 2023.9),
+ q2-types (>= 2023.9)
Description: QIIME 2 plugin for working with and visualizing Metadata
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
=====================================
debian/control.in
=====================================
@@ -0,0 +1,61 @@
+Source: q2-metadata
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Liubov Chuprikova <chuprikovalv at gmail.com>,
+ Étienne Mollier <emollier at debian.org>,
+ Steffen Moeller <moeller at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper-compat (= 13),
+ dh-sequence-python3,
+ python3,
+ python3-setuptools,
+ python3-pytest-cov,
+ python3-pandas,
+ python3-skbio (>= 0.5.8-2exp1~),
+ libjs-jquery-datatables,
+ qiime (>= @DEB_VERSION_UPSTREAM@),
+ q2templates (>= @DEB_VERSION_UPSTREAM@),
+ q2-quality-filter (>= @DEB_VERSION_UPSTREAM@),
+ q2-types (>= @DEB_VERSION_UPSTREAM@)
+Standards-Version: 4.6.2
+Vcs-Browser: https://salsa.debian.org/med-team/q2-metadata
+Vcs-Git: https://salsa.debian.org/med-team/q2-metadata.git
+Homepage: https://qiime2.org/
+Rules-Requires-Root: no
+
+Package: q2-metadata
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python3:Depends},
+ python3-numpy,
+ python3-scipy (>= 1.9),
+ python3-pandas,
+ python3-skbio (>= 0.5.8-2exp1~),
+ libjs-jquery-datatables,
+ qiime (>= 2022.11.1),
+ q2templates (>= @DEB_VERSION_UPSTREAM@),
+ q2-quality-filter (>= @DEB_VERSION_UPSTREAM@),
+ q2-types (>= @DEB_VERSION_UPSTREAM@)
+Description: QIIME 2 plugin for working with and visualizing Metadata
+ QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
+ package with a focus on data and analysis transparency. QIIME 2 enables
+ researchers to start an analysis with raw DNA sequence data and finish with
+ publication-quality figures and statistical results.
+ Key features:
+ * Integrated and automatic tracking of data provenance
+ * Semantic type system
+ * Plugin system for extending microbiome analysis functionality
+ * Support for multiple types of user interfaces (e.g. API, command line,
+ graphical)
+ .
+ QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
+ pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
+ retaining the features that makes QIIME 1 a powerful and widely-used analysis
+ pipeline.
+ .
+ QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
+ New functionality will regularly become available through QIIME 2 plugins. You
+ can view a list of plugins that are currently available on the QIIME 2 plugin
+ availability page. The future plugins page lists plugins that are being
+ developed.
=====================================
debian/rules
=====================================
@@ -14,8 +14,15 @@ export PYBUILD_AFTER_INSTALL=ln -vsf \
/usr/share/javascript/jquery-datatables/jquery.dataTables.min.js \
/{destdir}/{install_dir}/q2_metadata/templates/tabulate/datatables.min.js
+include /usr/share/dpkg/default.mk
+VERSION_UPSTREAM=$(shell echo $(DEB_VERSION_UPSTREAM) | sed -e 's/\(20[0-9][0-9]\.[0-9]\+\)\..*/\1/')
+
+debian/control: debian/control.in
+ echo "# This file is autogenerated from control.in to update versioned dependencies" > $@
+ sed -e"s/@DEB_VERSION_UPSTREAM@/$(VERSION_UPSTREAM)/g" $< >> $@
+
%:
- dh $@ --with python3 --buildsystem=pybuild
+ dh $@ --buildsystem=pybuild
# FIXME: similarly to the qiime and q2-types packages, the build time testing fails, as
# the Qiime plugin system is not fully available at this point of the package
=====================================
q2_metadata/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
- git_refnames = " (tag: 2023.7.0, Release-2023.7)"
- git_full = "5247a8c0f3bf099449cd31fade7bd5af545820b6"
- git_date = "2023-08-17 18:46:21 +0000"
+ git_refnames = " (tag: 2023.9.0, Release-2023.9)"
+ git_full = "0fa9efe8c8de6920f78e211c51e76157eb990022"
+ git_date = "2023-10-03 22:00:18 +0000"
keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
return keywords
View it on GitLab: https://salsa.debian.org/med-team/q2-metadata/-/compare/7838c2b140d8e667bfc767e9258f65c0bd908b8f...c12f8dd8b765349ce5900ee9d9efab1cc82b4f30
--
View it on GitLab: https://salsa.debian.org/med-team/q2-metadata/-/compare/7838c2b140d8e667bfc767e9258f65c0bd908b8f...c12f8dd8b765349ce5900ee9d9efab1cc82b4f30
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