[med-svn] [Git][med-team/python-cogent][upstream] New upstream version 2024.5.7a1+dfsg

[Ananthu C V (@weepingclown)]

Ananthu C V pushed to branch upstream at Debian Med / python-cogent


Commits:
7784254d by Ananthu C V at 2024-06-26T00:11:18+05:30
New upstream version 2024.5.7a1+dfsg
- - - - -


30 changed files:

- .github/ISSUE_TEMPLATE/deprecation.md
- .github/ISSUE_TEMPLATE/discontinue.md
- .github/dependabot.yml
- .github/workflows/codeql.yml
- .github/workflows/linters.yml
- .github/workflows/testing_develop.yml
- .gitignore
- .hgignore
- .hgtags
- + changelog.d/20240213_075007_Gavin.Huttley.md
- + changelog.d/20240216_114540_Gavin.Huttley.md
- + changelog.d/20240325_161732_Gavin.Huttley.md
- + changelog.d/20240328_134342_Gavin.Huttley.md
- + changelog.d/20240329_152534_Gavin.Huttley.md
- + changelog.d/20240418_113855_richard_dynamic_plugin_loading.md
- + changelog.d/20240426_082600_Gavin.Huttley.md
- + changelog.d/20240503_110440_u6096186_develop.md
- + changelog.d/20240507_164239_Gavin.Huttley.md
- changelog.md
- doc/app/align-codon.rst → doc/app/app_cookbook/align-codon.rst
- doc/app/align-nucleotide.rst → doc/app/app_cookbook/align-nucleotide.rst
- doc/app/align-protein.rst → doc/app/app_cookbook/align-protein.rst
- doc/app/index-align.rst → doc/app/app_cookbook/index-align.rst
- + doc/app/app_cookbook/index-loaders.rst
- + doc/app/app_cookbook/index-sample.rst
- + doc/app/app_cookbook/index-writers.rst
- + doc/app/app_cookbook/load-aligned.rst
- + doc/app/app_cookbook/load-json.rst
- + doc/app/app_cookbook/load-tabular.rst
- + doc/app/app_cookbook/load-unaligned.rst


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/commit/7784254de57e2a1b404d4d00b30bcdc7569153db

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