[med-svn] [Git][med-team/seqprep][master] 4 commits: fix-declarations.patch: new: fix ftbfs.

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / seqprep


Commits:
bd38f750 by Étienne Mollier at 2024-03-14T20:27:40+01:00
fix-declarations.patch: new: fix ftbfs.

Closes: #1066363

- - - - -
e072a499 by Étienne Mollier at 2024-03-14T19:32:34+00:00
Add IT bugs in 1.1-0biolinux1.

Changes-By: lintian-brush

- - - - -
c79a2e9b by Étienne Mollier at 2024-03-14T19:32:41+00:00
Update standards version to 4.6.2, no changes needed.

Changes-By: lintian-brush
Fixes: lintian: out-of-date-standards-version
See-also: https://lintian.debian.org/tags/out-of-date-standards-version.html

- - - - -
62afebe3 by Étienne Mollier at 2024-03-14T20:33:19+01:00
ready to upload to unstable.

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/fix-declarations.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+seqprep (1.3.2-9) unstable; urgency=medium
+
+  * fix-declarations.patch: new: fix ftbfs. (Closes: #1066363)
+  * Add ITP bug in seqprep version 1.1-0biolinux1.
+  * Update standards version to 4.6.2, no changes needed.
+
+ -- Étienne Mollier <emollier at debian.org>  Thu, 14 Mar 2024 20:32:47 +0100
+
 seqprep (1.3.2-8) unstable; urgency=medium
 
   * Fix watch file
@@ -139,6 +147,6 @@ seqprep (1.1-1) unstable; urgency=medium
 
 seqprep (1.1-0biolinux1) trusty; urgency=medium
 
-  * Initial release for Bio-Linux.
+  * Initial release for Bio-Linux. Closes: #778838
 
  -- Tim Booth <tbooth at ceh.ac.uk>  Thu, 19 Feb 2015 16:49:55 +0000


=====================================
debian/control
=====================================
@@ -8,7 +8,7 @@ Priority: optional
 Build-Depends: debhelper-compat (= 13),
                python3 <!nocheck>,
                zlib1g-dev
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/seqprep
 Vcs-Git: https://salsa.debian.org/med-team/seqprep.git
 Homepage: http://seqanswers.com/wiki/SeqPrep


=====================================
debian/patches/fix-declarations.patch
=====================================
@@ -0,0 +1,14 @@
+Description: add missing feature test macro for getopt.
+Author: Étienne Mollier <emollier at debian.org>
+Bug-Debian: https://bugs.debian.org/1066363
+Forwarded: no
+Last-Update: 2024-03-14
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- seqprep.orig/SeqPrep.c
++++ seqprep/SeqPrep.c
+@@ -1,3 +1,4 @@
++#define _POSIX_C_SOURCE 2
+ #include <stdio.h>
+ #include <stdlib.h>
+ #include <string.h>


=====================================
debian/patches/series
=====================================
@@ -2,3 +2,4 @@ fix_unused_variable_errors.patch
 hardening.patch
 replace-float-with-double.patch
 2to3.patch
+fix-declarations.patch



View it on GitLab: https://salsa.debian.org/med-team/seqprep/-/compare/99736adf1fb4c31d352a7c3f00cf03adcfa1e44a...62afebe33bb33c47a85cbb88a2cccb444caf3fab

-- 
View it on GitLab: https://salsa.debian.org/med-team/seqprep/-/compare/99736adf1fb4c31d352a7c3f00cf03adcfa1e44a...62afebe33bb33c47a85cbb88a2cccb444caf3fab
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