[med-svn] [Git][med-team/gmap][master] 5 commits: New upstream version 2024-05-20+ds

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / gmap


Commits:
a080c8a8 by Étienne Mollier at 2024-05-26T11:44:52+02:00
New upstream version 2024-05-20+ds
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530730f2 by Étienne Mollier at 2024-05-26T11:44:59+02:00
Update upstream source from tag 'upstream/2024-05-20+ds'

Update to upstream version '2024-05-20+ds'
with Debian dir 937f9a7e8d53ee3e0ccfc0d6eccf94c08652e868
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0456eeb4 by Étienne Mollier at 2024-05-26T11:45:34+02:00
update changelog

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ac60ac2f by Étienne Mollier at 2024-05-26T11:46:36+02:00
Unfuzz patches.

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9a3260a4 by Étienne Mollier at 2024-05-26T12:00:47+02:00
ready to upload to unstable.

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29 changed files:

- ChangeLog
- VERSION
- debian/changelog
- debian/patches/remove_getopt_code_copy.patch
- debian/patches/simd_fixes
- src/Makefile.am
- src/access.c
- src/altsplice.c
- src/altsplice.h
- src/auxinfo.c
- src/extension-search.c
- src/extension-search.h
- src/genome_sites.c
- src/genome_sites.h
- src/genomebits_indel.c
- src/genomebits_indel.h
- src/gsnap.c
- src/hitlistpool.c
- src/indel.c
- src/indel.h
- src/intersect-lower-large.c
- src/intersect-lower-small.c
- src/intlist.c
- src/intlist.h
- src/junction.c
- src/junction.h
- src/kmer-search.c
- src/kmer-search.h
- src/knownsplicing.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/gmap/-/compare/9c3d01061559fcc8d0df56de6c2e1931698ee8d4...9a3260a49dac89850b062cf5ecc4d5f8e7e15f85

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View it on GitLab: https://salsa.debian.org/med-team/gmap/-/compare/9c3d01061559fcc8d0df56de6c2e1931698ee8d4...9a3260a49dac89850b062cf5ecc4d5f8e7e15f85
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