[med-svn] [Git][med-team/bali-phy][master] 2 commits: d/t/run-unit-test: update to new data layout.

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / bali-phy


Commits:
eb95bade by Étienne Mollier at 2024-05-29T10:18:55+02:00
d/t/run-unit-test: update to new data layout.

One of the tests was also using an input model working only in very
specific conditions, which do not seem matched anymore, so the test
is adjusted to make use of another input model.

- - - - -
fae85d05 by Étienne Mollier at 2024-05-29T10:20:33+02:00
update the changelog.

- - - - -


2 changed files:

- debian/changelog
- debian/tests/run-unit-test


Changes:

=====================================
debian/changelog
=====================================
@@ -8,8 +8,12 @@ bali-phy (4.0~beta13+dfsg-1) experimental; urgency=medium
   * d/control: add myself to uploaders.
   * d/control: build depends on libboost-json-dev.
   * d/t/run-unit-test: set a temporary home to not meddle with end user's.
+  * d/t/run-unit-test: update to new data layout.
+    One of the tests was also using an input model working only in very
+    specific conditions, which do not seem matched anymore, so the test
+    is adjusted to make use of another input model.
 
- -- Étienne Mollier <emollier at debian.org>  Wed, 29 May 2024 09:28:23 +0200
+ -- Étienne Mollier <emollier at debian.org>  Wed, 29 May 2024 10:20:12 +0200
 
 bali-phy (4.0~beta2+dfsg-1) experimental; urgency=medium
 


=====================================
debian/tests/run-unit-test
=====================================
@@ -17,8 +17,8 @@ export HOME="$AUTOPKGTEST_TMP"
 bali-phy --version
 bali-phy --help
 
-bali-phy sequences/5S-rRNA/5d.fasta --test --seed=0
-bali-phy sequences/5S-rRNA/5d.fasta --iter=50 --seed=0
-bali-phy sequences/5S-rRNA/5d.fasta --iter=200 -Inone --seed=0
-bali-phy sequences/5S-rRNA/5d.fasta --iter=100
+bali-phy 5S-rRNA/5d.fasta --test --seed=0
+bali-phy 5S-rRNA/5d.fasta --iter=50 --seed=0
+bali-phy 5S-rRNA/5d.fasta --iter=200 -I rs07 --seed=0
+bali-phy 5S-rRNA/5d.fasta --iter=100
 bp-analyze 5d-1



View it on GitLab: https://salsa.debian.org/med-team/bali-phy/-/compare/efe47b9f923d73112bacc4f8a5cffb0f900d7eea...fae85d055cf2c31aff7294111b5c02eacbbd6903

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