[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Nov 3 01:43:18 GMT 2024



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
9d14100d by Andreas Tille at 2024-11-03T01:43:12+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
+Last-Update: Sun, 03 Nov 2024 01:42:04 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -8,9 +8,9 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  gnumed-server                 |     12 | {covid-19,practice}                        | 
  orthanc-gdcm                  |     12 | {imaging}                                  | 
  icb-utils                     |     11 | {bio-dev}                                  | 
- king                          |     11 | {typesetting,imaging}                      | 
+ king                          |     11 | {imaging,typesetting}                      | 
  orthanc-mysql                 |     10 | {imaging}                                  | 
- oscar                         |     10 | {tools,practice,data}                      | 
+ oscar                         |     10 | {practice,data,tools}                      | 
  orthanc-postgresql            |      9 | {imaging}                                  | 
  heudiconv                     |      8 | {imaging}                                  | 
  adun.app                      |      7 | {bio}                                      | 
@@ -22,9 +22,9 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  piler                         |      6 | {bio}                                      | 
  treeview                      |      5 | {bio-phylogeny,bio}                        | 
  ants                          |      4 | {imaging}                                  | 
- embassy-domainatrix           |      4 | {cloud,bio}                                | 
- proalign                      |      4 | {bio-phylogeny,bio}                        | 
- anfo                          |      3 | {bio,cloud}                                | 
+ embassy-domainatrix           |      4 | {bio,cloud}                                | 
+ proalign                      |      4 | {bio,bio-phylogeny}                        | 
+ anfo                          |      3 | {cloud,bio}                                | 
  biojava6-live                 |      3 | {bio-dev}                                  | 
  embassy-domalign              |      3 | {bio,cloud}                                | 
  getdata                       |      3 | {bio}                                      | 
@@ -33,29 +33,29 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  melting                       |      3 | {bio,cloud}                                | 
  phyutility                    |      3 | {bio,cloud}                                | 
  savvy                         |      3 | {bio}                                      | 
- sibsim4                       |      3 | {cloud,bio}                                | 
+ sibsim4                       |      3 | {bio,cloud}                                | 
  staden                        |      3 | {bio}                                      | 
  embassy-domsearch             |      2 | {cloud,bio}                                | 
  fastml                        |      2 | {bio}                                      | 
  librdp-taxonomy-tree-java     |      2 | {bio-dev}                                  | 
  metaphlan                     |      2 | {bio}                                      | 
  rdp-classifier                |      2 | {bio}                                      | 
- rtax                          |      2 | {cloud,bio}                                | 
+ rtax                          |      2 | {bio,cloud}                                | 
  saint                         |      2 | {bio}                                      | 
  seq-gen                       |      2 | {bio}                                      | 
  spread-phy                    |      2 | {bio,bio-phylogeny}                        | 
  suitename                     |      2 | {bio}                                      | 
- acedb                         |      1 | {bio,cloud}                                | 
- bio-tradis                    |      1 | {bio,bio-dev}                              | 
+ acedb                         |      1 | {cloud,bio}                                | 
+ bio-tradis                    |      1 | {bio-dev,bio}                              | 
  brig                          |      1 | {bio}                                      | 
  btllib                        |      1 | {bio}                                      | 
  cmtk                          |      1 | {imaging}                                  | 
- cufflinks                     |      1 | {cloud,bio}                                | 
+ cufflinks                     |      1 | {bio,cloud}                                | 
  dextractor                    |      1 | {covid-19,bio}                             | 
  emboss-explorer               |      1 | {bio}                                      | 
  htscodecs                     |      1 | {covid-19,bio-dev}                         | 
  insighttoolkit5               |      1 | {imaging-dev}                              | 
- jmodeltest                    |      1 | {bio,bio-phylogeny}                        | 
+ jmodeltest                    |      1 | {bio-phylogeny,bio}                        | 
  libctapimkt                   |      1 | {practice}                                 | 
  libdivsufsort                 |      1 | {bio-dev}                                  | 
  libgenome                     |      1 | {bio-dev}                                  | 
@@ -64,7 +64,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  malt                          |      1 | {bio}                                      | 
  mauve-aligner                 |      1 | {bio}                                      | 
  megan-ce                      |      1 | {bio}                                      | 
- mhap                          |      1 | {bio-ngs,bio}                              | 
+ mhap                          |      1 | {bio,bio-ngs}                              | 
  ncbi-igblast                  |      1 | {bio}                                      | 
  placnet                       |      1 | {bio}                                      | 
  provean                       |      1 | {bio}                                      | 
@@ -78,10 +78,10 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  sprai                         |      1 | {bio}                                      | 
  surankco                      |      1 | {bio}                                      | 
  surpyvor                      |      1 | {bio}                                      | 
- tophat-recondition            |      1 | {bio,covid-19}                             | 
+ tophat-recondition            |      1 | {covid-19,bio}                             | 
  tracetuner                    |      1 | {bio}                                      | 
- varscan                       |      1 | {bio,covid-19}                             | 
- vienna-rna                    |      1 | {bio,covid-19}                             | 
+ varscan                       |      1 | {covid-19,bio}                             | 
+ vienna-rna                    |      1 | {covid-19,bio}                             | 
  bambamc                       |      0 | {bio-dev}                                  | 
  beast-mcmc                    |      0 | {bio,bio-phylogeny}                        | 
  biojava4-live                 |      0 | {bio-dev}                                  | 
@@ -114,7 +114,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  libchado-perl                 |      0 | {bio-dev}                                  | 
  libgkarrays                   |      0 | {bio-dev}                                  | 
  libhmsbeagle                  |      0 | {bio-dev}                                  | 
- libics                        |      0 | {imaging-dev,covid-19}                     | 
+ libics                        |      0 | {covid-19,imaging-dev}                     | 
  libmaus2                      |      0 | {bio-dev,covid-19}                         | 
  libmems                       |      0 | {bio-dev}                                  | 
  libmialm                      |      0 | {imaging-dev}                              | 
@@ -138,12 +138,12 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  papyrus                       |      0 | {imaging-dev}                              | 
  pbcopper                      |      0 | {bio-dev}                                  | 
  pbseqlib                      |      0 | {bio-dev}                                  | 
- pigx-rnaseq                   |      0 | {covid-19,bio}                             | 
+ pigx-rnaseq                   |      0 | {bio,covid-19}                             | 
  plasmidid                     |      0 | {bio,covid-19}                             | 
  plasmidseeker                 |      0 | {bio}                                      | 
  python-cgelib                 |      0 | {bio-dev}                                  | 
  python-seqcluster             |      0 | {bio}                                      | 
- python-seqcluster             |      0 | {bio-dev,covid-19}                         | 
+ python-seqcluster             |      0 | {covid-19,bio-dev}                         | 
  qcumber                       |      0 | {bio}                                      | 
  resfinder-db                  |      0 | {bio}                                      | 
  savvy                         |      0 | {bio-dev}                                  | 
@@ -154,7 +154,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:03 +0000
  smrtanalysis                  |      0 | {covid-19,bio}                             | 
  soapsnp                       |      0 | {bio}                                      | 
  srf                           |      0 | {bio-dev}                                  | 
- thesias                       |      0 | {bio,covid-19}                             | 
+ thesias                       |      0 | {covid-19,bio}                             | 
  trace2dbest                   |      0 | {bio}                                      | 
  xdffileio                     |      0 | {imaging-dev}                              | 
  xxsds-dynamic                 |      0 | {bio-dev}                                  | 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
+Last-Update: Sun, 03 Nov 2024 01:42:09 +0000
 
        Source                              | Vote   |             Tasks                                                   |                              Tags                               
 -------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------------------
@@ -16,9 +16,9 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  scalapack                                 |     36 | {nanoscale-physics-dev}                                             | 
  imview                                    |     32 | {viewing}                                                           | 
  arduino-mk                                |     31 | {robotics}                                                          | 
- flann                                     |     30 | {mathematics-dev,engineering-dev}                                   | 
+ flann                                     |     30 | {engineering-dev,mathematics-dev}                                   | 
  cliquer                                   |     29 | {mathematics}                                                       | 
- fftw                                      |     29 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
+ fftw                                      |     29 | {physics-dev,mathematics-dev,meteorology-dev}                       | 
  flintqs                                   |     29 | {mathematics}                                                       | 
  libm4ri                                   |     25 | {mathematics-dev}                                                   | 
  mbpoll                                    |     25 | {simulations}                                                       | 
@@ -39,7 +39,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  bossa                                     |     13 | {devices}                                                           | 
  fftw                                      |     13 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
  gts                                       |     13 | {viewing-dev}                                                       | 
- libitpp                                   |     13 | {engineering-dev,mathematics-dev}                                   | 
+ libitpp                                   |     13 | {mathematics-dev,engineering-dev}                                   | 
  metar                                     |     13 | {meteorology}                                                       | 
  picosat                                   |     13 | {logic}                                                             | 
  feedgnuplot                               |     12 | {viewing}                                                           | 
@@ -56,13 +56,13 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  eccodes                                   |     10 | {meteorology-dev}                                                   | 
  feff85exafs                               |     10 | {chemistry}                                                         | 
  guiqwt                                    |     10 | {numericalcomputation,viewing}                                      | 
- libvigraimpex                             |     10 | {imageanalysis-dev,machine-learning}                                | 
+ libvigraimpex                             |     10 | {machine-learning,imageanalysis-dev}                                | 
  ratpoints                                 |     10 | {mathematics-dev}                                                   | 
- lxi-tools                                 |      9 | {dataacquisition,engineering}                                       | 
+ lxi-tools                                 |      9 | {engineering,dataacquisition}                                       | 
  libccp4                                   |      8 | {nanoscale-physics-dev}                                             | 
  ros-vcstool                               |      8 | {robotics-dev}                                                      | 
  persalys                                  |      7 | {statistics,mathematics,engineering}                                | 
- coinor-symphony                           |      6 | {numericalcomputation,mathematics,logic}                            | 
+ coinor-symphony                           |      6 | {logic,mathematics,numericalcomputation}                            | 
  dune-localfunctions                       |      6 | {mathematics-dev}                                                   | 
  ncl                                       |      6 | {meteorology-dev}                                                   | 
  silo-llnl                                 |      6 | {engineering}                                                       | 
@@ -79,40 +79,40 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  muparser                                  |      5 | {mathematics-dev}                                                   | 
  opencascade                               |      5 | {simulations}                                                       | 
  vdt                                       |      5 | {mathematics-dev}                                                   | 
- debian-science                            |      4 | {machine-learning,nanoscale-physics,economics,mathematics,physics}  | 
+ debian-science                            |      4 | {nanoscale-physics,mathematics,economics,physics,machine-learning}  | 
  ipe-tools                                 |      4 | {typesetting}                                                       | 
  libcgns                                   |      4 | {engineering}                                                       | 
  nrn-iv                                    |      4 | {biology}                                                           | 
- persalys                                  |      4 | {statistics,mathematics,engineering}                                | 
+ persalys                                  |      4 | {mathematics,engineering,statistics}                                | 
  rheolef                                   |      4 | {mathematics}                                                       | 
  ros-ros-environment                       |      4 | {robotics-dev}                                                      | 
  silo-llnl                                 |      4 | {engineering}                                                       | 
  urdfdom-headers                           |      4 | {robotics-dev}                                                      | 
- coinmp                                    |      3 | {mathematics-dev,numericalcomputation,logic}                        | 
- debian-science                            |      3 | {neuroscience-cognitive,machine-learning}                           | 
+ coinmp                                    |      3 | {mathematics-dev,logic,numericalcomputation}                        | 
+ debian-science                            |      3 | {machine-learning,neuroscience-cognitive}                           | 
  etsf-io                                   |      3 | {physics,nanoscale-physics}                                         | 
- getdp                                     |      3 | {engineering,mathematics,simulations}                               | 
+ getdp                                     |      3 | {simulations,mathematics,engineering}                               | 
  hdf-eos5                                  |      3 | {meteorology-dev}                                                   | 
  libcgns                                   |      3 | {engineering-dev}                                                   | 
  libgctp                                   |      3 | {meteorology-dev}                                                   | 
  libmatheval                               |      3 | {mathematics}                                                       | 
  libmatheval                               |      3 | {mathematics-dev}                                                   | 
- libvigraimpex                             |      3 | {imageanalysis-dev,machine-learning}                                | 
+ libvigraimpex                             |      3 | {machine-learning,imageanalysis-dev}                                | 
  libxsmm                                   |      3 | {mathematics-dev}                                                   | 
  ncrystal                                  |      3 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  sagemath-database-conway-polynomials      |      3 | {mathematics}                                                       | 
  sdpb                                      |      3 | {highenergy-physics,numericalcomputation}                           | 
  silo-llnl                                 |      3 | {engineering-dev}                                                   | 
  syrthes                                   |      3 | {engineering}                                                       | 
- toulbar2                                  |      3 | {mathematics,logic,numericalcomputation,physics}                    | 
- trilinos                                  |      3 | {physics-dev,engineering-dev,mathematics-dev}                       | 
+ toulbar2                                  |      3 | {physics,logic,numericalcomputation,mathematics}                    | 
+ trilinos                                  |      3 | {engineering-dev,mathematics-dev,physics-dev}                       | 
  ufo-core                                  |      3 | {nanoscale-physics-dev}                                             | 
  veccore                                   |      3 | {mathematics-dev}                                                   | 
  apophenia                                 |      2 | {statistics}                                                        | 
  auto-07p                                  |      2 | {mathematics}                                                       | 
  cld2                                      |      2 | {linguistics}                                                       | 
- debian-science                            |      2 | {physics,economics,nanoscale-physics,machine-learning}              | 
- debian-science                            |      2 | {statistics,economics,nanoscale-physics,physics}                    | 
+ debian-science                            |      2 | {economics,physics,nanoscale-physics,machine-learning}              | 
+ debian-science                            |      2 | {statistics,physics,nanoscale-physics,economics}                    | 
  dxflib                                    |      2 | {engineering-dev}                                                   | 
  ecbuild                                   |      2 | {meteorology-dev}                                                   | 
  ipe-tools                                 |      2 | {typesetting}                                                       | 
@@ -122,15 +122,15 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  looptools                                 |      2 | {highenergy-physics}                                                | 
  lrcalc                                    |      2 | {mathematics}                                                       | 
  metview                                   |      2 | {meteorology}                                                       | 
- mmdb                                      |      2 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ mmdb                                      |      2 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  mpi4py-fft                                |      2 | {mathematics-dev}                                                   | 
  mrmpi                                     |      2 | {tools}                                                             | 
  newmat                                    |      2 | {mathematics-dev}                                                   | 
  openigtlink                               |      2 | {robotics-dev}                                                      | 
  openstereogram                            |      2 | {tools}                                                             | 
  polylib                                   |      2 | {mathematics}                                                       | 
- python-escript                            |      2 | {engineering,numericalcomputation,simulations}                      | 
- refmac-dictionary                         |      2 | {chemistry,highenergy-physics-dev}                                  | 
+ python-escript                            |      2 | {numericalcomputation,engineering,simulations}                      | 
+ refmac-dictionary                         |      2 | {highenergy-physics-dev,chemistry}                                  | 
  scram                                     |      2 | {engineering}                                                       | 
  toontag                                   |      2 | {numericalcomputation}                                              | 
  apache-opennlp                            |      1 | {linguistics}                                                       | 
@@ -150,7 +150,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  hpcc                                      |      1 | {distributedcomputing,numericalcomputation}                         | 
  iapws                                     |      1 | {meteorology}                                                       | 
  libcvd                                    |      1 | {imageanalysis}                                                     | 
- liblxi                                    |      1 | {dataacquisition-dev,engineering-dev}                               | 
+ liblxi                                    |      1 | {engineering-dev,dataacquisition-dev}                               | 
  looptools                                 |      1 | {highenergy-physics-dev}                                            | 
  magma                                     |      1 | {numericalcomputation,mathematics-dev}                              | 
  nrn-mod2c                                 |      1 | {biology}                                                           | 
@@ -162,7 +162,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  sardana                                   |      1 | {dataacquisition}                                                   | 
  schroedinger-coordgenlibs                 |      1 | {nanoscale-physics-dev,chemistry}                                   | 
  siscone                                   |      1 | {highenergy-physics-dev}                                            | 
- spfft                                     |      1 | {mathematics-dev,nanoscale-physics-dev,physics-dev,meteorology-dev} | 
+ spfft                                     |      1 | {meteorology-dev,nanoscale-physics-dev,physics-dev,mathematics-dev} | 
  ssm                                       |      1 | {nanoscale-physics-dev}                                             | 
  taurus                                    |      1 | {dataacquisition}                                                   | 
  toon                                      |      1 | {numericalcomputation}                                              | 
@@ -183,7 +183,7 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  apriltag                                  |      0 | {robotics-dev}                                                      | 
  atlas-ecmwf                               |      0 | {meteorology}                                                       | 
  atlas-ecmwf                               |      0 | {meteorology-dev}                                                   | 
- calculix-ccx-doc                          |      0 | {simulations,engineering,numericalcomputation}                      | 
+ calculix-ccx-doc                          |      0 | {engineering,numericalcomputation,simulations}                      | 
  calculix-ccx-test                         |      0 | {simulations,engineering,numericalcomputation}                      | 
  ckon                                      |      0 | {highenergy-physics-dev}                                            | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
@@ -214,21 +214,21 @@ Last-Update: Sat, 02 Nov 2024 13:42:09 +0000
  libdogleg                                 |      0 | {mathematics-dev}                                                   | 
  libelas                                   |      0 | {robotics-dev}                                                      | 
  libfolia                                  |      0 | {linguistics}                                                       | 
- libgtkdatabox                             |      0 | {viewing-dev,engineering-dev}                                       | 
+ libgtkdatabox                             |      0 | {engineering-dev,viewing-dev}                                       | 
  liblbfgs                                  |      0 | {mathematics-dev}                                                   | 
  liborigin2                                |      0 | {viewing-dev}                                                       | 
  libquantum                                |      0 | {numericalcomputation}                                              | 
  libsdsl                                   |      0 | {dataacquisition-dev}                                               | 
  mbt                                       |      0 | {linguistics}                                                       | 
  mbtserver                                 |      0 | {linguistics}                                                       | 
- mctc-lib                                  |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ mctc-lib                                  |      0 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  meshsdfilter                              |      0 | {mathematics-dev}                                                   | 
  metis-edf                                 |      0 | {numericalcomputation,engineering}                                  | 
  metis-edf                                 |      0 | {engineering-dev}                                                   | 
  metkit                                    |      0 | {meteorology}                                                       | 
  metkit                                    |      0 | {meteorology-dev}                                                   | 
  mseed2sac                                 |      0 | {dataacquisition-dev}                                               | 
- neartree                                  |      0 | {mathematics-dev,numericalcomputation}                              | 
+ neartree                                  |      0 | {numericalcomputation,mathematics-dev}                              | 
  ompl                                      |      0 | {robotics}                                                          | 
  ompl                                      |      0 | {robotics-dev}                                                      | 
  opengv                                    |      0 | {geometry}                                                          | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 02 Nov 2024 13:42:13 +0000
+Last-Update: Sun, 03 Nov 2024 01:42:13 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9d14100d4eb0c5b396be63f6c93cbf4ee52d6224

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View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9d14100d4eb0c5b396be63f6c93cbf4ee52d6224
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