[med-svn] [Git][med-team/bbmap][master] 4 commits: New upstream version 39.13+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / bbmap


Commits:
b0e0e145 by Étienne Mollier at 2024-11-30T18:32:52+01:00
New upstream version 39.13+dfsg
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04ea8955 by Étienne Mollier at 2024-11-30T18:33:01+01:00
Update upstream source from tag 'upstream/39.13+dfsg'

Update to upstream version '39.13+dfsg'
with Debian dir df90c6f1a7906d85c62ee7346a78539a8590265e
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d3879525 by Étienne Mollier at 2024-11-30T18:35:38+01:00
32bit.patch: unfuzz.

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01238f99 by Étienne Mollier at 2024-11-30T18:41:15+01:00
d/changelog: ready for upload to unstable.

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14 changed files:

- README.md
- bbduk.sh
- calcmem.sh
- current/aligner/MicroAligner.java
- current/aligner/MicroAligner2.java
- + current/aligner/MicroAligner3.java
- + current/aligner/MicroIndex3.java
- current/aligner/SideChannel.java → current/aligner/SideChannel3.java
- current/barcode/DemuxData.java
- current/barcode/PCRMatrix.java
- − current/barcode/PCRMatrixHDist_old.java
- current/fun/Dongle.java
- current/hiseq/AnalyzeFlowCell.java
- − current/hiseq/AnalyzeFlowCellMT0.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/78ddc662f275cdb50c353947df795b1ec3fff319...01238f99c179f51c4c1cff82b0e62c81c9db7ab5

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View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/78ddc662f275cdb50c353947df795b1ec3fff319...01238f99c179f51c4c1cff82b0e62c81c9db7ab5
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