[med-svn] [Git][med-team/biojava-live][master] 3 commits: Removed the -java-doc package

[Emmanuel Bourg (@ebourg)]

Emmanuel Bourg pushed to branch master at Debian Med / biojava-live


Commits:
4e1be2d0 by Emmanuel Bourg at 2024-10-07T09:59:14+02:00
Removed the -java-doc package

- - - - -
055bb4e6 by Emmanuel Bourg at 2024-10-07T09:59:22+02:00
Standards-Version updated to 4.7.0

- - - - -
81f9913b by Emmanuel Bourg at 2024-10-07T09:59:27+02:00
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- − debian/libbiojava-java-doc.doc-base
- − debian/libbiojava-java-doc.install
- − debian/libbiojava-java-doc.links
- − debian/libbiojava-java-doc.lintian-overrides


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+biojava-live (1:1.9.7+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
+  * Removed the -java-doc package
+  * Standards-Version updated to 4.7.0
+
+ -- Emmanuel Bourg <ebourg at apache.org>  Mon, 07 Oct 2024 09:59:24 +0200
+
 biojava-live (1:1.9.7+dfsg-1) unstable; urgency=medium
 
   * New upstream version 1.9.7+dfsg


=====================================
debian/control
=====================================
@@ -13,10 +13,8 @@ Build-Depends-Indep: default-jdk,
                      libcommons-dbcp-java,
                      libjaxb-api-java,
                      libjgrapht0.8-java,
-                     libjgrapht0.8-java-doc,
-                     libmaven-javadoc-plugin-java,
                      libxerces2-java
-Standards-Version: 4.6.2
+Standards-Version: 4.7.0
 Vcs-Browser: https://salsa.debian.org/med-team/biojava-live
 Vcs-Git: https://salsa.debian.org/med-team/biojava-live.git
 Homepage: https://www.biojava.org
@@ -27,7 +25,6 @@ Architecture: all
 Depends: ${misc:Depends},
          ${maven:Depends}
 Suggests: libbiojava-java,
-          libbiojava-java-doc,
           ${maven:OptionalDepends}
 Conflicts: libbiojava1.7-java
 Replaces: libbiojava1.7-java
@@ -62,18 +59,3 @@ Description: Java API to biological data and applications (default version)
  .
  This is a dependency package which should enable smooth upgrades to new
  versions.
-
-Package: libbiojava-java-doc
-Architecture: all
-Section: doc
-Depends: ${misc:Depends},
-         ${maven:DocDepends}
-Suggests: libbiojava-java,
-          ${maven:DocOptionalDepends}
-Multi-Arch: foreign
-Description: [Biology] Documentation for BioJava
- BioJava is an open-source project dedicated to providing a Java framework
- for processing biological data.
- .
- This package contains the HTML documentation describing the API of BioJava
- which was generated automatically by JavaDoc.


=====================================
debian/libbiojava-java-doc.doc-base deleted
=====================================
@@ -1,26 +0,0 @@
-Document: biojava
-Title: biojava API
-Author: BioJava developers
-Abstract: Javadoc-generated API for the BioJava library.
- BioJava is an open-source project dedicated to providing a Java framework
- for processing biological data. It includes objects for manipulating
- sequences, file parsers, DAS client and server support, access to BioSQL
- and Ensembl databases, and powerful analysis and statistical routines
- including a dynamic programming toolkit.
- .
- BioJava is provided by a vibrant community which meets annually at
- the Bioinformatics Open Source Conference (BOSC) that traditionally
- accompanies the Intelligent Systems in Molecular Biology (ISMB)
- meeting. Much like BioPerl, the employment of this library is valuable
- for everybody active in the field because of the many tricks of the
- trade one learns just by communicating on the mailing list.
- .
- If using BioJava, please cite: R.C.G. Holland, T. Down, M. Pocock,
- A. Prlić, D. Huen, K. James, S. Foisy, A. Dräger, A. Yates,
- M. Heuer; M.J. Schreiber (2008) "BioJava: an Open-Source Framework
- for Bioinformatics" Bioinformatics 24(18):2096-2097.
-Section: Science/Biology
-
-Format: HTML
-Index: /usr/share/doc/libbiojava-java/apidocs/index-all.html
-Files: /usr/share/doc/libbiojava-java/apidocs/*.html /usr/share/doc/libbiojava-java/apidocs/*/*/*.html /usr/share/doc/libbiojava-java/apidocs/*/*/*/*.html /usr/share/doc/libbiojava-java/apidocs/*/*/*/*/*.html /usr/share/doc/libbiojava-java/apidocs/*/*/*/*/*/*.html /usr/share/doc/libbiojava-java-doc/apidocs/*/*/*/*/*/*/*.html /usr/share/doc/libbiojava-java/apidocs/*/*/*/*/*/*/*/*.html


=====================================
debian/libbiojava-java-doc.install deleted
=====================================
@@ -1 +0,0 @@
-target/site/apidocs usr/share/doc/libbiojava-java


=====================================
debian/libbiojava-java-doc.links deleted
=====================================
@@ -1 +0,0 @@
-usr/share/doc/libbiojava-java/apidocs usr/share/doc/libbiojava-java-doc/apidocs


=====================================
debian/libbiojava-java-doc.lintian-overrides deleted
=====================================
@@ -1,4 +0,0 @@
-# It would be too complicated to remove the javascript that is included in
-# javadocs, see the discussion on Debian Java mailing list starting at 
-# https://lists.debian.org/debian-java/2018/06/msg00020.html.
-embedded-javascript-library please use * [usr/share/doc/libbiojava-java/apidocs/script-dir/*]



View it on GitLab: https://salsa.debian.org/med-team/biojava-live/-/compare/3d6ea7c753c6525d480aa0fa09c7db3d4d87883e...81f9913b91b0573d06bc0e2c3df76482d3807164

-- 
View it on GitLab: https://salsa.debian.org/med-team/biojava-live/-/compare/3d6ea7c753c6525d480aa0fa09c7db3d4d87883e...81f9913b91b0573d06bc0e2c3df76482d3807164
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