[med-svn] [Git][med-team/samtools][master] 7 commits: New upstream version 1.21

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / samtools


Commits:
4d88bb51 by Michael R. Crusoe at 2024-11-14T12:34:54+01:00
New upstream version 1.21
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604c7739 by Michael R. Crusoe at 2024-11-14T12:34:54+01:00
New upstream version

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70892c0f by Michael R. Crusoe at 2024-11-14T12:35:14+01:00
Update upstream source from tag 'upstream/1.21'

Update to upstream version '1.21'
with Debian dir 56313df8ab2a8964f030941dba216a7a5beb6dd6
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7e718801 by Michael R. Crusoe at 2024-11-14T20:28:18+01:00
d/rules: build-depend on newer htslib 1.21. Closes: #1087456

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136ec3be by Michael R. Crusoe at 2024-11-14T20:29:17+01:00
routine-update: Ready to upload to experimental

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0f4e00b5 by Étienne Mollier at 2025-02-06T21:54:42+01:00
reproducible.patch: normalise Last-Update timestamp.

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06658a8d by Étienne Mollier at 2025-02-06T22:00:51+01:00
d/changelog: ready for upload to unstable.

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30 changed files:

- Makefile
- NEWS.md
- README
- amplicon_stats.c
- bam2depth.c
- bam_ampliconclip.c
- bam_ampliconclip.h
- bam_cat.c
- bam_consensus.c
- bam_fastq.c
- bam_import.c
- bam_index.c
- bam_mate.c
- bam_md.c
- bam_sort.c
- bam_split.c
- bam_tview.c
- bam_tview_curses.c
- bam_tview_html.c
- bamtk.c
- bedidx.c
- coverage.c
- debian/changelog
- debian/control
- debian/patches/reproducible.patch
- doc/samtools-addreplacerg.1
- doc/samtools-ampliconclip.1
- doc/samtools-ampliconstats.1
- doc/samtools-bedcov.1
- doc/samtools-calmd.1


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/c449bd74c00d8b010d2584ba3d393eb2335408c7...06658a8dc4ccdcefd8a401e578261b50e47120bb

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View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/c449bd74c00d8b010d2584ba3d393eb2335408c7...06658a8dc4ccdcefd8a401e578261b50e47120bb
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