[med-svn] [Git][med-team/bbmap][master] 3 commits: New upstream version 39.15+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / bbmap


Commits:
2238a54e by Étienne Mollier at 2025-02-13T20:50:13+01:00
New upstream version 39.15+dfsg
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882f919c by Étienne Mollier at 2025-02-13T20:50:26+01:00
Update upstream source from tag 'upstream/39.15+dfsg'

Update to upstream version '39.15+dfsg'
with Debian dir 0a3eba2fc3d3edbfe427597dda803d63f4b100a6
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9c6ec710 by Étienne Mollier at 2025-02-13T20:54:21+01:00
d/changelog: ready for upload to unstable.

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30 changed files:

- README.md
- a_sample_mt.sh
- callgenes.sh
- clumpify.sh
- current/align2/RandomReads3.java
- current/aligner/MicroAligner3.java
- current/aligner/SideChannel3.java
- + current/bin/Bin.java
- + current/bin/BinObject.java
- + current/bin/BinSketcher.java
- + current/bin/Binner.java
- + current/bin/Cluster.java
- + current/bin/Contig.java
- + current/bin/ContigRenamer.java
- + current/bin/DataLoader.java
- + current/bin/FileRenamer.java
- + current/bin/QuickBin.java
- + current/bin/RandomReadsMG.java
- + current/bin/SimilarityMeasures.java
- + current/bin/SketchRecord.java
- + current/bin/Sketchable.java
- current/bloom/BloomFilter.java
- current/bloom/PolyFilter.java
- current/clump/Clump.java
- current/clump/ReadKey.java
- current/cluster/ClusterTools.java
- current/fileIO/ByteStreamWriter.java
- current/fun/Crunch.java
- current/hiseq/AnalyzeFlowCell.java
- current/hiseq/FlowCell.java


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/01238f99c179f51c4c1cff82b0e62c81c9db7ab5...9c6ec7106d44796c14c1832a2b4acae91a2423c6

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View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/01238f99c179f51c4c1cff82b0e62c81c9db7ab5...9c6ec7106d44796c14c1832a2b4acae91a2423c6
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