[med-svn] [Git][med-team/python-cooler][master] new release

[Alexandre Detiste (@detiste-guest)]

Alexandre Detiste pushed to branch master at Debian Med / python-cooler


Commits:
ad316ab9 by Alexandre Detiste at 2025-01-12T01:16:16+01:00
new release

- - - - -


3 changed files:

- debian/changelog
- debian/patches/pytest-coverage.patch
- debian/patches/skip-http-connection.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+python-cooler (0.10.3-1) unstable; urgency=medium
+
+  * Team upload.
+  * New upstream version 0.10.3
+  * Autopkgtest does not need python3-mock
+
+ -- Alexandre Detiste <tchet at debian.org>  Sun, 12 Jan 2025 01:11:57 +0100
+
 python-cooler (0.10.2-1) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/patches/pytest-coverage.patch
=====================================
@@ -6,11 +6,20 @@ Forwarded: not-needed
 Last-Update: 2023-11-29
 --- a/pyproject.toml
 +++ b/pyproject.toml
-@@ -122,27 +122,9 @@
- convention = "numpy"
- 
- [tool.pytest.ini_options]
--addopts = "--cov cooler --cov-config pyproject.toml --cov-report term-missing --cov-report html --cov-report=xml"
+@@ -124,36 +124,9 @@
+ minversion = "7"
+ log_cli_level = "INFO"
+ xfail_strict = true
+-addopts = [
+-    "-ra",
+-    "--strict-config",
+-    "--strict-markers",
+-    "--cov=cooler",
+-    "--cov-config=pyproject.toml",
+-    "--cov-report=term-missing",
+-    "--cov-report=html",
+-    "--cov-report=xml",
+-]
  filterwarnings = ["ignore::PendingDeprecationWarning"]
  testpaths = ["tests"]
  


=====================================
debian/patches/skip-http-connection.patch
=====================================
@@ -4,16 +4,6 @@ Forwarded: not-needed
 Last-Update: 2023-01-07
 ---
 This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
---- a/tests/test_util.py
-+++ b/tests/test_util.py
-@@ -166,6 +166,7 @@
-     util.read_chromsizes(op.join(datadir, "toy.chrom.sizes"))
- 
- 
-+ at pytest.mark.skip("This test needs Internet connectivity.")
- def test_fetch_chromsizes():
-     util.fetch_chromsizes("hg19")
- 
 --- a/tests/test_create.py
 +++ b/tests/test_create.py
 @@ -78,6 +78,7 @@



View it on GitLab: https://salsa.debian.org/med-team/python-cooler/-/commit/ad316ab92442c69091ae544294d1b31613fc459f

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-cooler/-/commit/ad316ab92442c69091ae544294d1b31613fc459f
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