[med-svn] [Git][med-team/python-gffutils][master] patch-out simplejson

[Alexandre Detiste (@detiste-guest)]

Alexandre Detiste pushed to branch master at Debian Med / python-gffutils


Commits:
12e89c43 by Alexandre Detiste at 2025-01-17T16:37:37+01:00
patch-out simplejson

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/pr235.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+python-gffutils (0.13-2) unstable; urgency=medium
+
+  * Team upload.
+  * Patch-out usage of simplejson
+
+ -- Alexandre Detiste <tchet at debian.org>  Fri, 17 Jan 2025 16:37:19 +0100
+
 python-gffutils (0.13-1) unstable; urgency=medium
 
   * Team Upload.


=====================================
debian/control
=====================================
@@ -10,7 +10,6 @@ Build-Depends: debhelper-compat (= 13),
                bedtools,
                python3-all,
                python3-setuptools,
-               python3-simplejson,
                python3-argcomplete,
                python3-argh,
                python3-pyfaidx,


=====================================
debian/patches/pr235.patch
=====================================
@@ -0,0 +1,32 @@
+From 653a14e0844acea193988dbd8fca6b44fcf09570 Mon Sep 17 00:00:00 2001
+From: Alexandre Detiste <alexandre.detiste at gmail.com>
+Date: Sat, 31 Aug 2024 12:36:23 +0200
+Subject: [PATCH] drop usage of Python2-era simplejson
+
+--- a/gffutils/feature.py
++++ b/gffutils/feature.py
+@@ -1,5 +1,5 @@
+ from pyfaidx import Fasta
+-import simplejson as json
++import json
+ from gffutils import constants
+ from gffutils import helpers
+ from gffutils import parser
+--- a/gffutils/helpers.py
++++ b/gffutils/helpers.py
+@@ -1,7 +1,7 @@
+ import copy
+ import sys
+ import os
+-import simplejson as json
++import json
+ import time
+ import tempfile
+ from gffutils import constants
+--- a/requirements.txt
++++ b/requirements.txt
+@@ -1,4 +1,3 @@
+ pyfaidx>=0.5.5.2
+ argh>=0.26.2
+ argcomplete>=1.9.4
+-simplejson


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 python3
 fix-version.patch
+pr235.patch



View it on GitLab: https://salsa.debian.org/med-team/python-gffutils/-/commit/12e89c43b64cdbe9ba2a1d9e574524617c73ada9

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View it on GitLab: https://salsa.debian.org/med-team/python-gffutils/-/commit/12e89c43b64cdbe9ba2a1d9e574524617c73ada9
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