[med-svn] [Git][med-team/python-biopython][upstream] New upstream version 1.85+dfsg

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch upstream at Debian Med / python-biopython


Commits:
91a38f13 by Michael R. Crusoe at 2025-01-29T15:21:42+01:00
New upstream version 1.85+dfsg
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28 changed files:

- .appveyor.yml
- .circleci/config.yml
- .github/workflows/ci.yml
- .pre-commit-config.yaml
- Bio/Align/__init__.py
- Bio/Align/_aligncore.c
- Bio/Align/_pairwisealigner.c
- Bio/Align/bigbed.py
- Bio/Align/interfaces.py
- Bio/Align/sam.py
- Bio/Align/stockholm.py
- Bio/Align/substitution_matrices/__init__.py
- Bio/AlignIO/MafIO.py
- Bio/Blast/NCBIWWW.py
- Bio/Blast/NCBIXML.py
- Bio/Blast/__init__.py
- Bio/Blast/_parser.py
- Bio/Blast/_writers.py
- Bio/Cluster/__init__.py
- Bio/Cluster/cluster.c
- Bio/Cluster/clustermodule.c
- Bio/Entrez/DTDs/esummary_clinvar.dtd
- Bio/Entrez/__init__.py
- Bio/GenBank/Scanner.py
- Bio/Nexus/Nexus.py
- Bio/Nexus/Nodes.py
- Bio/PDB/Atom.py
- Bio/PDB/StructureBuilder.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/commit/91a38f13e2e7c0bbbc3dcf2d40d2c00305756add

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