Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
22dfdd36 by Andreas Tille at 2025-07-18T01:42:57+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,2 +1,2 @@
-Last-Update: Thu, 17 Jul 2025 13:42:20 +0000
+Last-Update: Fri, 18 Jul 2025 01:42:04 +0000
=====================================
debian-science-tests.txt
=====================================
@@ -1,2 +1,2 @@
-Last-Update: Thu, 17 Jul 2025 13:42:21 +0000
+Last-Update: Fri, 18 Jul 2025 01:42:04 +0000
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 17 Jul 2025 13:42:21 +0000
+Last-Update: Fri, 18 Jul 2025 01:42:04 +0000
source | id | severity | title
@@ -486,7 +486,7 @@ CREATE VIEW
cct | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 1:1.0.3-1 | 2025-07-14 | 1:1.0.3-1 | 0 | | | | | | | | {stretch2bpo} | 20170919+dfsg-1~bpo9+1
cdbfasta | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 1.00+git20230710.da8f5ba+dfsg-1 | 2025-07-14 | 1.00+git20230710.da8f5ba+dfsg-1 | 0 | | | | | | | | {jessie2stretch,jessie2Xstretch,jessie2Xstretch-rcmd,jessie2stretch-rcmd,jessie-lts2stretch} | 0.99-20100722-3
cdk | | missing | | | | | | | | | | | | | | 2025-07-14 | 1:2.11-1 | 2025-07-14 | 1:2.11-1 | 0 | | | | | | | | {oldstable22testing,stable22sid} | 1:2.11-1
- centrifuge | {neutral,fail} | autopkgtest | testing_armhf, unstable_armhf | {NULL} | unstable_ppc64el, stable_armhf, stable_ppc64el, testing_ppc64el | {NULL} | | | | | | | | | | 2025-07-14 | 1.0.4.2-1 | 2025-07-14 | 1.0.4.2-1 | 0 | | | | | | | | |
+ centrifuge | {fail,neutral} | autopkgtest | testing_armhf, unstable_armhf | {NULL} | unstable_ppc64el, stable_armhf, stable_ppc64el, testing_ppc64el | {NULL} | | | | | | | | | | 2025-07-14 | 1.0.4.2-1 | 2025-07-14 | 1.0.4.2-1 | 0 | | | | | | | | |
cgview | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 0.0.20100111-7 | 2025-07-14 | 0.0.20100111-7 | 0 | | | | | | | | {jessie2bpo} | 0.0.20100111-1~bpo8+1
chemtool | | missing | | | | | | | | | | | | | | 2025-07-14 | 1.6.14-6 | 2025-07-14 | 1.6.14-6 | 0 | | | | | | | | {jessie2stretch-rcmd,jessie2Xstretch-rcmd,jessie-rcmd} | 1.6.14-1
chromhmm | {neutral} | autopkgtest | | | unstable_armhf, unstable_ppc64el, testing_armhf, testing_ppc64el | {NULL} | | | | | | | | | | 2025-07-14 | 1.26+dfsg-3 | 2025-07-14 | 1.26+dfsg-3 | 0 | | | | | | | | |
@@ -516,7 +516,7 @@ CREATE VIEW
ctn | | missing | | | | | | | | | | | | | | 2025-07-14 | 3.2.0~dfsg-8 | 2025-07-14 | 3.2.0~dfsg-8 | 0 | | | | | | | | {jessie-lts2stretch} | 3.2.0~dfsg-5
ctsim | {neutral} | autopkgtest | | | testing_arm64, stable_ppc64el, unstable_armhf, unstable_amd64, stable_armhf, unstable_ppc64el, stable_amd64, testing_ppc64el, unstable_arm64, testing_armhf, stable_arm64, testing_amd64 | {NULL} | | | | | | | | | | 2025-07-14 | 6.0.2-6 | 2025-07-14 | 6.0.2-6 | 0 | | | | | | | | {jessie-lts2stretch,jessie2Xstretch,jessie2Xstretch-rcmd} | 5.2.0-4
cufflinks | | missing | | | | | | | | | | | | | | 2025-07-14 | 2.2.1+dfsg.1-10 | 2025-07-14 | 2.2.1+dfsg.1-10 | 0 | | | | | | | | |
- cutesv | {fail,neutral} | autopkgtest | unstable_armhf, testing_armhf | {NULL} | testing_amd64, unstable_ppc64el, testing_arm64, unstable_arm64, unstable_amd64, testing_ppc64el | {NULL} | | | | | | | | | | 2025-07-14 | 2.1.1-1 | 2025-07-14 | 2.1.1-1 | 0 | | | | | | | | |
+ cutesv | {neutral,fail} | autopkgtest | unstable_armhf, testing_armhf | {NULL} | testing_amd64, unstable_ppc64el, testing_arm64, unstable_arm64, unstable_amd64, testing_ppc64el | {NULL} | | | | | | | | | | 2025-07-14 | 2.1.1-1 | 2025-07-14 | 2.1.1-1 | 0 | | | | | | | | |
cwltool | | autopkgtest-pkg-pybuild | | | | | | | | | | | | | | 2025-07-14 | 3.1.20250110105449-3 | 2025-07-14 | 3.1.20250110105449-3 | 0 | | | | | | | | {jessie2bpo} | 1.0.20170114120503-1~bpo8+1
cycle | | missing | | | | | | | | | | | | | | 2025-07-14 | 0.3.3-2 | 2025-07-14 | 0.3.3-2 | 0 | | | | | | | | {jessie2Xstretch-rcmd,jessie-lts2stretch} | 0.3.1-12
daligner | {fail} | autopkgtest | stable_armhf, unstable_armhf, testing_armhf | {NULL} | | | | | | | | | | | | 2025-07-14 | 1.0+git20240119.335105d-3 | 2025-07-14 | 1.0+git20240119.335105d-3 | 0 | | | | | | | | {jessie2bpo} | 1.0+20160927-1~bpo8+1
@@ -949,17 +949,17 @@ CREATE VIEW
q2-dada2 | {fail} | autopkgtest | unstable_arm64, testing_amd64, stable_ppc64el, unstable_amd64, stable_arm64, unstable_ppc64el, stable_armhf, testing_arm64, testing_armhf, testing_ppc64el, unstable_armhf | {NULL} | | | | | | | | | | | | 2024-04-04 | 2024.2.0-1 | 2025-07-14 | 2024.5.0-1 | 466 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-types","qiime"]} | | {sid-merged-usr} | 2022.11.2-2
q2-demux | {fail} | autopkgtest | testing_ppc64el, unstable_amd64, testing_amd64, stable_armhf, testing_armhf, unstable_ppc64el, unstable_armhf, testing_arm64, unstable_arm64 | {NULL} | | | | | | | | | | | | 2024-08-16 | 2024.5.0+dfsg-1 | 2025-07-14 | 2024.5.0+dfsg-1 | 332 | REJECTED_PERMANENTLY | - | 2024.5.0+dfsg-1 | f | {autopkgtest,block} | {"migrate-after":["q2-types","qiime"]} | | |
q2-emperor | {neutral} | autopkgtest | | | unstable_armhf, testing_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-08-27 | 2024.5.0-2 | 2025-07-14 | 2024.5.0-2 | 321 | REJECTED_NEEDS_APPROVAL | - | 2024.5.0-2 | f | {block} | {"migrate-after":["q2-types","qiime"]} | | |
- q2-feature-classifier | {neutral,fail} | autopkgtest | unstable_arm64, unstable_ppc64el, unstable_amd64 | {NULL} | testing_armhf, unstable_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-03-01 | 2023.7.0-1 | 2025-07-14 | 2024.2.0-1 | 500 | REJECTED_PERMANENTLY | - | 2024.2.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-feature-table","q2-quality-control","q2-taxa","q2-types","qiime"]} | | |
+ q2-feature-classifier | {fail,neutral} | autopkgtest | unstable_arm64, unstable_ppc64el, unstable_amd64 | {NULL} | testing_armhf, unstable_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-03-01 | 2023.7.0-1 | 2025-07-14 | 2024.2.0-1 | 500 | REJECTED_PERMANENTLY | - | 2024.2.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-feature-table","q2-quality-control","q2-taxa","q2-types","qiime"]} | | |
q2-feature-table | {fail} | autopkgtest | unstable_amd64, testing_ppc64el, testing_armhf, stable_armhf, unstable_ppc64el, testing_arm64, testing_amd64, stable_ppc64el, unstable_armhf, unstable_arm64, stable_amd64, stable_arm64 | {NULL} | | | | | | | | | | | | 2024-08-27 | 2024.5.0+dfsg-1 | 2025-07-14 | 2024.5.0+dfsg-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0+dfsg-1 | f | {autopkgtest,block} | {"migrate-after":["q2-types","qiime"]} | | |
q2-fragment-insertion | {fail} | autopkgtest | unstable_armhf, stable_armhf, testing_armhf, unstable_arm64, testing_arm64, unstable_ppc64el, testing_ppc64el, testing_amd64, unstable_amd64 | {NULL} | | | | | | | | | | | | 2024-08-27 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-types","qiime"]} | | |
q2-metadata | {fail} | autopkgtest | stable_armhf, testing_armhf, unstable_armhf | {NULL} | | | | | | | | | | | | 2024-08-27 | 2024.5.0+dfsg-1 | 2025-07-14 | 2024.5.0+dfsg-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0+dfsg-1 | f | {autopkgtest,block} | {"migrate-after":["q2-quality-filter","q2-types","qiime"]} | | |
q2-phylogeny | {fail} | autopkgtest | unstable_arm64, testing_ppc64el, unstable_armhf, stable_ppc64el, testing_armhf, testing_amd64, testing_arm64, unstable_ppc64el, stable_arm64, unstable_amd64, stable_armhf | {NULL} | | | | | | | | | | | | 2024-08-16 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 332 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-alignment","q2-types","qiime"]} | | |
q2-quality-control | {fail,neutral} | autopkgtest | testing_arm64, unstable_amd64, unstable_arm64, testing_ppc64el, unstable_ppc64el, testing_amd64 | {NULL} | testing_armhf, stable_armhf, unstable_armhf | {NULL} | | | | | | | | | | 2024-08-24 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 324 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-feature-table","q2-taxa","qiime"]} | | |
q2-quality-filter | {fail,neutral} | autopkgtest | unstable_arm64, unstable_amd64, testing_arm64, unstable_ppc64el, testing_amd64, testing_ppc64el | {NULL} | unstable_armhf, testing_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-08-27 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["q2-types","qiime"]} | | |
- q2-sample-classifier | {fail,neutral} | autopkgtest | unstable_ppc64el, unstable_amd64, testing_arm64, unstable_arm64, testing_ppc64el, testing_amd64 | {NULL} | testing_armhf, unstable_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-08-27 | 2024.5.0-2 | 2025-07-14 | 2024.5.0-2 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-2 | f | {autopkgtest,block} | {"migrate-after":["q2-feature-table","q2-types","qiime"]} | | |
+ q2-sample-classifier | {neutral,fail} | autopkgtest | unstable_ppc64el, unstable_amd64, testing_arm64, unstable_arm64, testing_ppc64el, testing_amd64 | {NULL} | testing_armhf, unstable_armhf, stable_armhf | {NULL} | | | | | | | | | | 2024-08-27 | 2024.5.0-2 | 2025-07-14 | 2024.5.0-2 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-2 | f | {autopkgtest,block} | {"migrate-after":["q2-feature-table","q2-types","qiime"]} | | |
q2-taxa | {neutral} | autopkgtest | | | stable_armhf, unstable_armhf, testing_armhf | {NULL} | | | | | | | | | | 2024-08-27 | 2024.5.0+dfsg-1 | 2025-07-14 | 2024.5.0+dfsg-1 | 321 | REJECTED_NEEDS_APPROVAL | - | 2024.5.0+dfsg-1 | f | {block} | {"migrate-after":["q2-types","qiime"]} | | |
q2-types | {fail} | autopkgtest | testing_amd64, stable_armhf, unstable_arm64, testing_ppc64el, unstable_armhf, unstable_ppc64el, testing_arm64, unstable_amd64, testing_armhf | {NULL} | | | | | | | | | | | | 2024-08-27 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | {"migrate-after":["qiime"]} | | |
- q2cli | {neutral,fail} | autopkgtest | stable_armhf, testing_amd64, testing_ppc64el, testing_arm64 | {NULL} | unstable_arm64, unstable_ppc64el, unstable_armhf, testing_armhf, unstable_amd64 | {NULL} | | | | | | | | | | 2024-07-22 | 2024.5.0-2 | 2025-07-14 | 2024.5.0-2 | 357 | REJECTED_PERMANENTLY | - | 2024.5.0-2 | f | {autopkgtest,block,depends} | {"migrate-after":["qiime"]} | | {sid-strict,oldstable222sid,sid-broken-symlinks,sid,sid-nodoc} | 2024.5.0-2
+ q2cli | {fail,neutral} | autopkgtest | stable_armhf, testing_amd64, testing_ppc64el, testing_arm64 | {NULL} | unstable_arm64, unstable_ppc64el, unstable_armhf, testing_armhf, unstable_amd64 | {NULL} | | | | | | | | | | 2024-07-22 | 2024.5.0-2 | 2025-07-14 | 2024.5.0-2 | 357 | REJECTED_PERMANENTLY | - | 2024.5.0-2 | f | {autopkgtest,block,depends} | {"migrate-after":["qiime"]} | | {sid-strict,oldstable222sid,sid-broken-symlinks,sid,sid-nodoc} | 2024.5.0-2
qcumber | | missing | | | | | | | | | | | | | | 2025-07-14 | 2.3.0-2 | 2025-07-14 | 2.3.0-2 | 0 | | | | | | | | |
qiime | {fail} | autopkgtest | unstable_armhf, unstable_ppc64el, stable_amd64, stable_arm64, testing_amd64, testing_armhf, testing_ppc64el, stable_ppc64el, testing_arm64, unstable_amd64, unstable_arm64 | {NULL} | | | | | | | | | | | | 2024-08-27 | 2024.5.0-1 | 2025-07-14 | 2024.5.0-1 | 321 | REJECTED_PERMANENTLY | - | 2024.5.0-1 | f | {autopkgtest,block} | null | | {jessie-lts2stretch,jessie2Xstretch-rcmd,jessie2Xstretch,jessie2stretch,jessie2stretch-rcmd} | None
qrisk2 | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 0.1.20150729-7 | 2025-07-14 | 0.1.20150729-7 | 0 | | | | | | | | {jessie2Xstretch-rcmd,jessie-lts2stretch} | 0.1.20150729-2
@@ -1167,7 +1167,7 @@ CREATE VIEW
soapdenovo2 | {fail} | autopkgtest | testing_armhf, testing_arm64, unstable_ppc64el, testing_ppc64el, stable_ppc64el, unstable_armhf, stable_arm64, unstable_arm64, stable_armhf | {NULL} | | | | | | | | | | | | 2025-07-14 | 242+dfsg-4 | 2025-07-14 | 242+dfsg-4 | 0 | | | | | | | | {jessie2Xstretch,jessie2Xstretch-rcmd,jessie2stretch-rcmd,jessie2stretch} | 240+dfsg1-2
soapsnp | | missing | | | | | | | | | | | | | | 2025-07-14 | 1.03-5 | 2025-07-14 | 1.03-5 | 0 | | | | | | | | |
solvate | {fail} | autopkgtest | unstable_ppc64el, stable_armhf, unstable_armhf, unstable_arm64, testing_armhf, stable_arm64, testing_ppc64el, stable_ppc64el, testing_arm64 | {NULL} | | | | | | | | | | | | 2025-07-14 | 1.0-3 | 2025-07-14 | 1.0-3 | 0 | | | | | | | | |
- sortmerna | {neutral,fail} | autopkgtest | unstable_arm64, stable_arm64, unstable_ppc64el, unstable_armhf, stable_ppc64el, testing_arm64, stable_armhf, testing_ppc64el, testing_armhf | {NULL} | testing_amd64, unstable_amd64 | {NULL} | | | | | | | | | | 2025-07-14 | 4.3.7-2 | 2025-07-14 | 4.3.7-2 | 0 | | | | | | | | |
+ sortmerna | {fail,neutral} | autopkgtest | unstable_arm64, stable_arm64, unstable_ppc64el, unstable_armhf, stable_ppc64el, testing_arm64, stable_armhf, testing_ppc64el, testing_armhf | {NULL} | testing_amd64, unstable_amd64 | {NULL} | | | | | | | | | | 2025-07-14 | 4.3.7-2 | 2025-07-14 | 4.3.7-2 | 0 | | | | | | | | |
sourmash | {fail} | autopkgtest-pkg-pybuild | testing_armhf, unstable_armhf | {NULL} | | | | | | | | | | | | 2025-07-14 | 4.8.14-3 | 2025-07-14 | 4.8.14-3 | 0 | | | | | | | | |
spades | {fail} | autopkgtest | testing_armhf, stable_ppc64el, stable_armhf, unstable_arm64, testing_ppc64el, unstable_ppc64el, unstable_armhf, stable_arm64, testing_arm64 | {NULL} | | | | | | | | | | | | 2025-07-14 | 4.0.0+really3.15.5+dfsg-1 | 2025-07-14 | 4.0.0+really3.15.5+dfsg-1 | 0 | | | | | | | | {jessie2bpo} | 3.9.0+dfsg-1~bpo8+1
spaln | {fail} | autopkgtest | testing_armhf, stable_armhf, unstable_armhf | {NULL} | | | | | | | | | | | | 2025-07-14 | 3.0.2+dfsg-2 | 2025-07-14 | 3.0.2+dfsg-2 | 0 | | | | | | | | |
@@ -1226,7 +1226,7 @@ CREATE VIEW
varscan | | missing | | | | | | | | | | | | | | 2025-07-14 | 2.4.3+dfsg-4 | 2025-07-14 | 2.4.3+dfsg-4 | 0 | | | | | | | | |
velvet | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 1.2.10+dfsg1-9 | 2025-07-14 | 1.2.10+dfsg1-9 | 0 | | | | | | | | {jessie-lts2stretch,jessie2Xstretch-rcmd,jessie2Xstretch,jessie2stretch,jessie2stretch-rcmd} | 1.2.10+dfsg1-3
velvetoptimiser | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 2.2.6-5 | 2025-07-14 | 2.2.6-5 | 0 | | | | | | | | {jessie2Xstretch-rcmd} | 2.2.5-5
- vg | {neutral,fail} | autopkgtest | unstable_arm64, unstable_amd64 | {NULL} | stable_ppc64el, testing_arm64, unstable_armhf, testing_armhf, stable_armhf, unstable_ppc64el, stable_arm64, testing_ppc64el | {NULL} | | | | | | | | | | 2022-09-05 | 1.30.0+ds-1 | 2025-07-14 | 1.59.0+ds-0.1 | 1043 | REJECTED_PERMANENTLY | - | 1.59.0+ds-0.1 | f | {autopkgtest,block} | null | | {sid-merged-usr} | 1.30.0+ds-1
+ vg | {fail,neutral} | autopkgtest | unstable_arm64, unstable_amd64 | {NULL} | stable_ppc64el, testing_arm64, unstable_armhf, testing_armhf, stable_armhf, unstable_ppc64el, stable_arm64, testing_ppc64el | {NULL} | | | | | | | | | | 2022-09-05 | 1.30.0+ds-1 | 2025-07-14 | 1.59.0+ds-0.1 | 1043 | REJECTED_PERMANENTLY | - | 1.59.0+ds-0.1 | f | {autopkgtest,block} | null | | {sid-merged-usr} | 1.30.0+ds-1
vienna-rna | | missing | | | | | | | | | | | | | | 2025-07-14 | 2.6.4+dfsg-1 | 2025-07-14 | 2.6.4+dfsg-1 | 0 | | | | | | | | |
virulencefinder | {fail} | autopkgtest | testing_armhf, stable_armhf, unstable_armhf | {NULL} | | | | | | | | | | | | 2025-07-14 | 2.0.5-2 | 2025-07-14 | 2.0.5-2 | 0 | | | | | | | | |
volpack | | autopkgtest | | | | | | | | | | | | | | 2025-07-14 | 1.0b3-10 | 2025-07-14 | 1.0b3-10 | 0 | | | | | | | | {jessie-rcmd,jessie-lts2stretch,jessie2Xstretch-rcmd,jessie2Xstretch,jessie2stretch-rcmd} | 1.0b3-5
=====================================
python-team-tests.txt
=====================================
@@ -1,2 +1,2 @@
-Last-Update: Thu, 17 Jul 2025 13:42:21 +0000
+Last-Update: Fri, 18 Jul 2025 01:42:04 +0000
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/22dfdd360456ebbc79ed9d44b0b4d62fad1eb957
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/22dfdd360456ebbc79ed9d44b0b4d62fad1eb957
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