[med-svn] [Git][med-team/ivar][master] 7 commits: New upstream version 1.4.4+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / ivar


Commits:
fe442deb by Étienne Mollier at 2025-03-01T18:53:12+01:00
New upstream version 1.4.4+dfsg
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81055f66 by Étienne Mollier at 2025-03-01T18:53:13+01:00
Update upstream source from tag 'upstream/1.4.4+dfsg'

Update to upstream version '1.4.4+dfsg'
with Debian dir f6f587186a40b470734a6a4a405311758f82a38c
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c2862553 by Étienne Mollier at 2025-03-01T18:55:40+01:00
privacy-breach.patch: refresh patch.

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bfa5f253 by Étienne Mollier at 2025-03-01T18:57:01+01:00
gcc-13.patch: delete: patch applied upstream.

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13fb4fbd by Étienne Mollier at 2025-03-01T19:02:32+01:00
gcc-13-2.patch: normalize Last-Update timestamp.

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1b2d7200 by Étienne Mollier at 2025-03-01T19:09:39+01:00
d/rules: fix breakage in .bed file permissions fixing.

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11d80721 by Étienne Mollier at 2025-03-01T19:10:17+01:00
d/changelog: ready for upload to unstable.

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52 changed files:

- Doxyfile
- config.h.in
- configure.ac
- debian/changelog
- debian/patches/gcc-13-2.patch
- − debian/patches/gcc-13.patch
- debian/patches/privacy-breach.patch
- debian/patches/series
- debian/rules
- docs/MANUAL.md
- docs/html/cookbookpage.html
- docs/html/dir_49e56c817e5e54854c35e136979f97ca.html
- docs/html/doxygen.svg
- docs/html/dynsections.js
- docs/html/index.html
- docs/html/installpage.html
- docs/html/manualpage.html
- docs/html/menu.js
- docs/html/pages.html
- docs/html/search/all_0.js
- docs/html/search/all_1.js
- docs/html/search/all_2.js
- docs/html/search/all_3.js
- docs/html/search/all_4.js
- docs/html/search/all_5.js
- docs/html/search/all_6.js
- docs/html/search/all_7.js
- docs/html/search/close.svg
- docs/html/search/mag.svg
- docs/html/search/mag_d.svg
- docs/html/search/mag_sel.svg
- docs/html/search/mag_seld.svg
- docs/html/search/search.js
- docs/html/search/searchdata.js
- docs/html/tabs.css
- docs/latex/cookbookpage.tex
- docs/latex/doxygen.sty
- docs/latex/index.tex
- docs/latex/installpage.tex
- docs/latex/longtable_doxygen.sty
- docs/latex/manualpage.tex
- docs/latex/refman.tex
- docs/man/man3/cookbookpage.3
- docs/man/man3/installpage.3
- docs/man/man3/manualpage.3
- src/call_variants.cpp
- src/call_variants.h
- src/ivar.cpp
- src/parse_gff.h
- src/primer_bed.h
- tests/test_variants.cpp
- tests/test_variants_reverse_strand.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/f5025dd3d56646c3ec3499773153c0c01f7e9f98...11d807211c0aa6bb2c465f87c55c001480bc7961

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View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/f5025dd3d56646c3ec3499773153c0c01f7e9f98...11d807211c0aa6bb2c465f87c55c001480bc7961
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