[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun May 25 02:43:21 BST 2025



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
0620d76a by Andreas Tille at 2025-05-25T01:43:16+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,9 +1,9 @@
-Last-Update: Sat, 24 May 2025 13:42:04 +0000
+Last-Update: Sun, 25 May 2025 01:42:03 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
  dicomscope                    |     29 | {imaging}                                  | 
- oscar                         |     17 | {data,practice,tools}                      | 
+ oscar                         |     17 | {data,tools,practice}                      | 
  mrtrix3                       |     16 | {imaging}                                  | 
  pixelmed                      |     16 | {imaging}                                  | 
  orthanc-gdcm                  |     13 | {imaging}                                  | 
@@ -33,20 +33,20 @@ Last-Update: Sat, 24 May 2025 13:42:04 +0000
  libgenome                     |      2 | {bio-dev}                                  | 
  libpal-java                   |      2 | {bio-dev}                                  | 
  plasmidid                     |      2 | {covid-19,bio}                             | 
- beast-mcmc                    |      1 | {bio,bio-phylogeny}                        | 
+ beast-mcmc                    |      1 | {bio-phylogeny,bio}                        | 
  bitseq                        |      1 | {bio}                                      | 
  blimps                        |      1 | {bio}                                      | 
  brig                          |      1 | {bio}                                      | 
- cufflinks                     |      1 | {cloud,bio}                                | 
+ cufflinks                     |      1 | {bio,cloud}                                | 
  dextractor                    |      1 | {bio,covid-19}                             | 
  eegdev                        |      1 | {imaging-dev}                              | 
  elastix                       |      1 | {imaging}                                  | 
- embassy-domainatrix           |      1 | {cloud,bio}                                | 
+ embassy-domainatrix           |      1 | {bio,cloud}                                | 
  emboss-explorer               |      1 | {bio}                                      | 
  hinge                         |      1 | {bio}                                      | 
  htscodecs                     |      1 | {bio-dev,covid-19}                         | 
  ipig                          |      1 | {bio}                                      | 
- jmodeltest                    |      1 | {bio,bio-phylogeny}                        | 
+ jmodeltest                    |      1 | {bio-phylogeny,bio}                        | 
  lamarc                        |      1 | {bio}                                      | 
  libbio-mage-utils-perl        |      1 | {bio-dev}                                  | 
  libbiosoup-dev                |      1 | {bio-dev}                                  | 
@@ -62,18 +62,18 @@ Last-Update: Sat, 24 May 2025 13:42:04 +0000
  mssstest                      |      1 | {tools}                                    | 
  opencfu                       |      1 | {laboratory}                               | 
  pbcopper                      |      1 | {bio-dev}                                  | 
- phyutility                    |      1 | {cloud,bio}                                | 
- proalign                      |      1 | {bio-phylogeny,bio}                        | 
- python-seqcluster             |      1 | {covid-19,bio-dev}                         | 
+ phyutility                    |      1 | {bio,cloud}                                | 
+ proalign                      |      1 | {bio,bio-phylogeny}                        | 
+ python-seqcluster             |      1 | {bio-dev,covid-19}                         | 
  rambo-k                       |      1 | {bio}                                      | 
  runcircos-gui                 |      1 | {bio}                                      | 
  seq-gen                       |      1 | {bio}                                      | 
- spread-phy                    |      1 | {bio-phylogeny,bio}                        | 
+ spread-phy                    |      1 | {bio,bio-phylogeny}                        | 
  tracetuner                    |      1 | {bio}                                      | 
  treeview                      |      1 | {bio-phylogeny,bio}                        | 
  vienna-rna                    |      1 | {bio,covid-19}                             | 
  xdffileio                     |      1 | {imaging-dev}                              | 
- acedb                         |      0 | {cloud,bio}                                | 
+ acedb                         |      0 | {bio,cloud}                                | 
  bambamc                       |      0 | {bio-dev}                                  | 
  biojava4-live                 |      0 | {bio-dev}                                  | 
  biojava6-live                 |      0 | {bio-dev}                                  | 
@@ -139,11 +139,11 @@ Last-Update: Sat, 24 May 2025 13:42:04 +0000
  savvy                         |      0 | {bio}                                      | 
  sbmltoolbox                   |      0 | {bio-dev}                                  | 
  sga                           |      0 | {bio}                                      | 
- sibsim4                       |      0 | {cloud,bio}                                | 
+ sibsim4                       |      0 | {bio,cloud}                                | 
  sift                          |      0 | {bio}                                      | 
  sight                         |      0 | {imaging-dev}                              | 
  skesa                         |      0 | {bio}                                      | 
- smrtanalysis                  |      0 | {covid-19,bio}                             | 
+ smrtanalysis                  |      0 | {bio,covid-19}                             | 
  soapaligner                   |      0 | {bio}                                      | 
  soapsnp                       |      0 | {bio}                                      | 
  sprai                         |      0 | {bio}                                      | 
@@ -151,10 +151,10 @@ Last-Update: Sat, 24 May 2025 13:42:04 +0000
  suitename                     |      0 | {bio}                                      | 
  surankco                      |      0 | {bio}                                      | 
  surpyvor                      |      0 | {bio}                                      | 
- thesias                       |      0 | {bio,covid-19}                             | 
- tophat-recondition            |      0 | {bio,covid-19}                             | 
+ thesias                       |      0 | {covid-19,bio}                             | 
+ tophat-recondition            |      0 | {covid-19,bio}                             | 
  trace2dbest                   |      0 | {bio}                                      | 
- varscan                       |      0 | {covid-19,bio}                             | 
+ varscan                       |      0 | {bio,covid-19}                             | 
  xxsds-dynamic                 |      0 | {bio-dev}                                  | 
  tipp                          |     -1 | {covid-19,bio}                             | 
 (181 rows)


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 24 May 2025 13:42:08 +0000
+Last-Update: Sun, 25 May 2025 01:42:09 +0000
 
        Source                              | Vote   |             Tasks                                                   |                        Tags                         
 -------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------
@@ -17,7 +17,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  arduino-mk                                |     33 | {robotics}                                                          | 
  flann                                     |     32 | {mathematics-dev,engineering-dev}                                   | 
  visidata                                  |     31 | {datamanagement}                                                    | 
- fftw                                      |     30 | {mathematics-dev,physics-dev,meteorology-dev}                       | 
+ fftw                                      |     30 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
  flintqs                                   |     28 | {mathematics}                                                       | 
  libm4ri                                   |     28 | {mathematics-dev}                                                   | 
  cliquer                                   |     27 | {mathematics}                                                       | 
@@ -34,7 +34,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  libitpp                                   |     15 | {mathematics-dev,engineering-dev}                                   | 
  teem                                      |     15 | {imageanalysis}                                                     | 
  cliquer                                   |     14 | {mathematics-dev}                                                   | 
- fftw                                      |     14 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
+ fftw                                      |     14 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
  lrcalc                                    |     14 | {mathematics-dev}                                                   | 
  eccodes                                   |     13 | {meteorology,meteorology-dev}                                       | 
  eccodes                                   |     13 | {meteorology-dev}                                                   | 
@@ -46,19 +46,19 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  gf2x                                      |     12 | {mathematics-dev}                                                   | 
  iml                                       |     12 | {mathematics-dev}                                                   | 
  libhomfly                                 |     12 | {mathematics-dev}                                                   | 
- lxi-tools                                 |     12 | {engineering,dataacquisition}                                       | 
+ lxi-tools                                 |     12 | {dataacquisition,engineering}                                       | 
  libm4rie                                  |     11 | {mathematics-dev}                                                   | 
  matlab-support                            |     11 | {mathematics,numericalcomputation}                                  | 
  ncl                                       |     11 | {meteorology}                                                       | 
  geg                                       |     10 | {viewing}                                                           | 
  guiqwt                                    |     10 | {numericalcomputation,viewing}                                      | 
  libzn-poly                                |     10 | {mathematics-dev}                                                   | 
- python-escript                            |     10 | {numericalcomputation,simulations,engineering}                      | 
- coinor-symphony                           |      9 | {logic,mathematics,numericalcomputation}                            | 
+ python-escript                            |     10 | {numericalcomputation,engineering,simulations}                      | 
+ coinor-symphony                           |      9 | {mathematics,numericalcomputation,logic}                            | 
  magics++                                  |      9 | {meteorology-dev}                                                   | 
  odc                                       |      9 | {meteorology}                                                       | 
  odc                                       |      9 | {meteorology-dev}                                                   | 
- persalys                                  |      9 | {engineering,statistics,mathematics}                                | 
+ persalys                                  |      9 | {mathematics,engineering,statistics}                                | 
  python-cdo                                |      9 | {meteorology}                                                       | 
  ratpoints                                 |      9 | {mathematics-dev}                                                   | 
  ros-rosconsole                            |      9 | {robotics-dev}                                                      | 
@@ -67,12 +67,12 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  rubiks                                    |      8 | {geometry,mathematics}                                              | 
  dxsamples                                 |      7 | {nanoscale-physics}                                                 | 
  opencascade                               |      7 | {simulations}                                                       | 
- persalys                                  |      7 | {statistics,mathematics,engineering}                                | 
+ persalys                                  |      7 | {engineering,statistics,mathematics}                                | 
  vdt                                       |      7 | {mathematics-dev}                                                   | 
  apophenia                                 |      6 | {statistics}                                                        | 
  auto-07p                                  |      6 | {mathematics}                                                       | 
  form                                      |      6 | {mathematics}                                                       | 
- getdp                                     |      6 | {engineering,mathematics,simulations}                               | 
+ getdp                                     |      6 | {mathematics,simulations,engineering}                               | 
  libccp4                                   |      6 | {nanoscale-physics-dev}                                             | 
  ucto                                      |      6 | {linguistics}                                                       | 
  uctodata                                  |      6 | {linguistics}                                                       | 
@@ -80,7 +80,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  cld2                                      |      5 | {linguistics}                                                       | 
  coda                                      |      5 | {meteorology-dev}                                                   | 
  coda                                      |      5 | {meteorology}                                                       | 
- debian-science                            |      5 | {economics,nanoscale-physics,machine-learning,physics,mathematics}  | 
+ debian-science                            |      5 | {mathematics,physics,machine-learning,nanoscale-physics,economics}  | 
  fpzip                                     |      5 | {meteorology}                                                       | 
  ncl                                       |      5 | {meteorology-dev}                                                   | 
  rheolef                                   |      5 | {mathematics}                                                       | 
@@ -100,7 +100,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  muparser                                  |      4 | {mathematics-dev}                                                   | 
  qwtplot3d                                 |      4 | {viewing-dev}                                                       | 
  toontag                                   |      4 | {numericalcomputation}                                              | 
- toulbar2                                  |      4 | {logic,numericalcomputation,mathematics,physics}                    | 
+ toulbar2                                  |      4 | {mathematics,logic,physics,numericalcomputation}                    | 
  veccore                                   |      4 | {mathematics-dev}                                                   | 
  apertium-eval-translator                  |      3 | {linguistics}                                                       | 
  cmor                                      |      3 | {meteorology}                                                       | 
@@ -123,10 +123,10 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  silo-llnl                                 |      3 | {engineering-dev}                                                   | 
  vlfeat                                    |      3 | {imageanalysis-dev}                                                 | 
  asl                                       |      2 | {physics-dev}                                                       | 
- code-saturne                              |      2 | {mathematics-dev,engineering-dev}                                   | 
- coinmp                                    |      2 | {logic,mathematics-dev,numericalcomputation}                        | 
+ code-saturne                              |      2 | {engineering-dev,mathematics-dev}                                   | 
+ coinmp                                    |      2 | {logic,numericalcomputation,mathematics-dev}                        | 
  debian-science                            |      2 | {neuroscience-cognitive}                                            | 
- debian-science                            |      2 | {physics,machine-learning,economics,nanoscale-physics}              | 
+ debian-science                            |      2 | {physics,economics,machine-learning,nanoscale-physics}              | 
  dune-functions                            |      2 | {mathematics-dev}                                                   | 
  dune-localfunctions                       |      2 | {mathematics-dev}                                                   | 
  dune-typetree                             |      2 | {mathematics-dev}                                                   | 
@@ -138,12 +138,12 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  mbt                                       |      2 | {linguistics}                                                       | 
  mbtserver                                 |      2 | {linguistics}                                                       | 
  mrmpi                                     |      2 | {tools}                                                             | 
- ncrystal                                  |      2 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ ncrystal                                  |      2 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  newmat                                    |      2 | {mathematics-dev}                                                   | 
  python-aws-xray-sdk                       |      2 | {dataacquisition-dev}                                               | 
  sac2mseed                                 |      2 | {geography}                                                         | 
  sagemath-database-conway-polynomials      |      2 | {mathematics}                                                       | 
- sdpb                                      |      2 | {numericalcomputation,highenergy-physics}                           | 
+ sdpb                                      |      2 | {highenergy-physics,numericalcomputation}                           | 
  silo-llnl                                 |      2 | {engineering}                                                       | 
  spaghetti                                 |      2 | {geography}                                                         | 
  syrthes                                   |      2 | {engineering}                                                       | 
@@ -160,7 +160,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  clipper                                   |      1 | {nanoscale-physics-dev}                                             | 
  cmor                                      |      1 | {meteorology-dev}                                                   | 
  coda                                      |      1 | {meteorology-dev}                                                   | 
- code-saturne                              |      1 | {engineering-dev,mathematics-dev}                                   | 
+ code-saturne                              |      1 | {mathematics-dev,engineering-dev}                                   | 
  coinor-bonmin                             |      1 | {mathematics}                                                       | 
  debian-science                            |      1 | {neuroscience-cognitive,machine-learning}                           | 
  debian-science                            |      1 | {electrophysiology}                                                 | 
@@ -183,9 +183,9 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  libquantum                                |      1 | {numericalcomputation}                                              | 
  looptools                                 |      1 | {highenergy-physics-dev}                                            | 
  looptools                                 |      1 | {highenergy-physics}                                                | 
- magma                                     |      1 | {mathematics-dev,numericalcomputation}                              | 
+ magma                                     |      1 | {numericalcomputation,mathematics-dev}                              | 
  metkit                                    |      1 | {meteorology-dev}                                                   | 
- mmdb                                      |      1 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
+ mmdb                                      |      1 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
  mseed2sac                                 |      1 | {dataacquisition-dev}                                               | 
  nrn-iv                                    |      1 | {biology}                                                           | 
  nrn-mod2c                                 |      1 | {biology}                                                           | 
@@ -195,10 +195,10 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  openstereogram                            |      1 | {tools}                                                             | 
  qd                                        |      1 | {mathematics-dev}                                                   | 
  sardana                                   |      1 | {dataacquisition}                                                   | 
- schroedinger-coordgenlibs                 |      1 | {nanoscale-physics-dev,chemistry}                                   | 
+ schroedinger-coordgenlibs                 |      1 | {chemistry,nanoscale-physics-dev}                                   | 
  scram                                     |      1 | {engineering}                                                       | 
  siscone                                   |      1 | {highenergy-physics-dev}                                            | 
- spfft                                     |      1 | {mathematics-dev,nanoscale-physics-dev,physics-dev,meteorology-dev} | 
+ spfft                                     |      1 | {meteorology-dev,physics-dev,mathematics-dev,nanoscale-physics-dev} | 
  ssm                                       |      1 | {nanoscale-physics-dev}                                             | 
  tulip                                     |      1 | {viewing-dev}                                                       | 
  x13as                                     |      1 | {economics}                                                         | 
@@ -211,7 +211,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
  apriltag                                  |      0 | {robotics-dev}                                                      | 
- calculix-ccx-test                         |      0 | {simulations,numericalcomputation,engineering}                      | 
+ calculix-ccx-test                         |      0 | {simulations,engineering,numericalcomputation}                      | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
  coda                                      |      0 | {meteorology-dev}                                                   | 
  code-saturne                              |      0 | {engineering}                                                       | 
@@ -232,13 +232,13 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  mbt                                       |      0 | {linguistics}                                                       | 
  mctc-lib                                  |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  meshsdfilter                              |      0 | {mathematics-dev}                                                   | 
+ metis-edf                                 |      0 | {numericalcomputation,engineering}                                  | 
  metis-edf                                 |      0 | {engineering-dev}                                                   | 
- metis-edf                                 |      0 | {engineering,numericalcomputation}                                  | 
  neartree                                  |      0 | {mathematics-dev,numericalcomputation}                              | 
  opengv                                    |      0 | {geometry}                                                          | 
  openigtlink                               |      0 | {robotics-dev}                                                      | 
  psurface                                  |      0 | {numericalcomputation}                                              | 
- python-escript                            |      0 | {numericalcomputation,simulations,engineering}                      | 
+ python-escript                            |      0 | {engineering,numericalcomputation,simulations}                      | 
  python-opcodes                            |      0 | {tools}                                                             | 
  qrupdate                                  |      0 | {mathematics-dev}                                                   | 
  quadrule                                  |      0 | {mathematics-dev}                                                   | 
@@ -254,7 +254,7 @@ Last-Update: Sat, 24 May 2025 13:42:08 +0000
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
  schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
- slicot                                    |      0 | {robotics-dev,engineering-dev}                                      | 
+ slicot                                    |      0 | {engineering-dev,robotics-dev}                                      | 
  sparskit                                  |      0 | {mathematics-dev}                                                   | 
  ssm                                       |      0 | {nanoscale-physics}                                                 | 
  tachyon                                   |      0 | {mathematics}                                                       | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 24 May 2025 13:42:11 +0000
+Last-Update: Sun, 25 May 2025 01:42:12 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0620d76a9544293d84f69588642002b103c14511

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0620d76a9544293d84f69588642002b103c14511
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