[med-svn] [Git][med-team/python-pysam][upstream] New upstream version 0.23.3+ds

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / python-pysam


Commits:
25e366d5 by Étienne Mollier at 2025-11-14T12:32:40+01:00
New upstream version 0.23.3+ds
- - - - -


33 changed files:

- − .cirrus.yml
- − Containerfile
- INSTALL
- NEWS
- README.rst
- bcftools/bcftools.pysam.h
- − devtools/buildwheels.sh
- − devtools/conda-recipe/build.sh
- − devtools/conda-recipe/meta.yaml
- + devtools/emulate-tools.py
- − devtools/install-CGAT-tools.sh
- devtools/install-prerequisites.sh
- − devtools/run_tests_travis.sh
- doc/installation.rst
- import/pysam.h
- pyproject.toml
- + pysam/conftest_cstd.c
- pysam/libcalignedsegment.pxd
- pysam/libcalignedsegment.pyi
- pysam/libcalignedsegment.pyx
- pysam/libcalignmentfile.pyx
- pysam/libcbcf.pyx
- pysam/libchtslib.pxd
- pysam/libctabix.pyx
- pysam/libcutils.pxd
- pysam/libcutils.pyx
- pysam/version.py
- samtools/samtools.pysam.h
- setup.py
- tests/AlignedSegment_test.py
- tests/compile_test.py
- − tests/refactoring.pl
- tests/samtools_test.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-pysam/-/commit/25e366d523d3dc51f8da4fc6c48e88b726cf7209

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