[med-svn] [Git][med-team/python-pysam][master] 2 commits: skip-test-on-32-bit.patch: skip further tests.

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / python-pysam


Commits:
9afc7326 by Étienne Mollier at 2025-11-14T14:10:19+01:00
skip-test-on-32-bit.patch: skip further tests.

- - - - -
6fd1e17f by Étienne Mollier at 2025-11-14T14:10:55+01:00
d/changelog: ready for upload to unstable.

- - - - -


2 changed files:

- debian/changelog
- debian/patches/skip-test-on-32-bit.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+python-pysam (0.23.3+ds-2) unstable; urgency=medium
+
+  * skip-test-on-32-bit.patch: skip further tests.
+
+ -- Étienne Mollier <emollier at debian.org>  Fri, 14 Nov 2025 14:10:45 +0100
+
 python-pysam (0.23.3+ds-1) unstable; urgency=medium
 
   * New upstream version 0.23.3+ds  (Closes: #1120205)


=====================================
debian/patches/skip-test-on-32-bit.patch
=====================================
@@ -1,7 +1,8 @@
 Description: Attempt skipping failing test on 32-bit
 Author: Nilesh Patra <nilesh at debian.org>
-Forwarded: not-needed
-Last-Update: 2021-10-15
+Bug: https://github.com/pysam-developers/pysam/issues/1367
+Reviewed-By: Étienne Mollier <emollier at debian.org>
+Last-Update: 2025-11-14
 ---
 --- python-pysam.orig/tests/samtools_test.py
 +++ python-pysam/tests/samtools_test.py
@@ -32,3 +33,24 @@ Last-Update: 2021-10-15
      map_command = {
      }
  
+--- python-pysam.orig/tests/compile_test.py
++++ python-pysam/tests/compile_test.py
+@@ -8,6 +8,7 @@
+ 
+ # clean up previous compilation
+ import os
++import platform
+ import pytest
+ import pysam
+ from TestUtils import make_data_files, BAM_DATADIR, CBCF_DATADIR, TABIX_DATADIR
+@@ -53,6 +54,10 @@
+     assert nread == 237
+ 
+ 
++ at pytest.mark.skipif(
++    platform.architecture()[0] != '64bit',
++    reason="64-bit specific tests"
++)
+ class TestBinaryCompatibility:
+     def test_alignments(self):
+         fp = pysam.AlignmentFile(os.path.join(BAM_DATADIR, "ex1.bam"))



View it on GitLab: https://salsa.debian.org/med-team/python-pysam/-/compare/346f990c89814b5df88eaf7512d9ded230cda702...6fd1e17f8ebef366d52a63b7a274bdd5a7330346

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-pysam/-/compare/346f990c89814b5df88eaf7512d9ded230cda702...6fd1e17f8ebef366d52a63b7a274bdd5a7330346
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