[med-svn] [Git][med-team/delly][master] 8 commits: New upstream version 1.7.2

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / delly


Commits:
14968bb4 by Étienne Mollier at 2025-11-15T11:00:03+01:00
New upstream version 1.7.2
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0035c00d by Étienne Mollier at 2025-11-15T11:00:05+01:00
Update upstream source from tag 'upstream/1.7.2'

Update to upstream version '1.7.2'
with Debian dir 7ab1fbf9bfb0c00a600d853bd38c528945aeefce
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b35199a4 by Étienne Mollier at 2025-11-15T11:01:44+01:00
d/control: declare compliance to standards version 4.7.2.

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48408a12 by Étienne Mollier at 2025-11-15T11:02:04+01:00
d/control: drop redundant Rules-Requires-Root: no.

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dd563e5e by Étienne Mollier at 2025-11-15T11:04:33+01:00
d/watch: convert to v5 Github template.

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f53416cc by Étienne Mollier at 2025-11-15T11:13:35+01:00
d/changelog: initialise the changelog.

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6337dc66 by Étienne Mollier at 2025-11-15T11:14:55+01:00
d/control: activate pyproject support.

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62b7dff0 by Étienne Mollier at 2025-11-15T11:19:07+01:00
d/changelog: ready for upload to unstable.

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51 changed files:

- .github/workflows/c-cpp.yml
- .github/workflows/compiler.yml
- + .github/workflows/macos-15.yml
- .github/workflows/macosx.yml
- + .github/workflows/release.yml
- + .zenodo.json
- Dockerfile
- Makefile
- R/gcbias.R
- R/rd.R
- README.md
- debian/changelog
- debian/control
- debian/watch
- + pyproject.toml
- + scripts/README.md
- + scripts/__init.py__
- + scripts/delly2bnd.py
- src/align.h
- src/asmode.h
- src/assemble.h
- src/bolog.h
- − src/chimera.h
- src/cluster.h
- src/cnv.h
- − src/compvcf.h
- src/coral.h
- src/coverage.h
- src/delly.cpp
- src/delly.h
- − src/dpe.h
- src/edlib.cpp
- src/gaf.h
- src/gcbias.h
- src/genotype.h
- src/gfa.h
- src/junction.h
- − src/markdup.h
- src/merge.h
- src/modvcf.h
- src/msa.h
- src/needle.h
- src/pangenome.h
- src/scan.h
- src/shortpe.h
- src/split.h
- src/tags.h
- src/tegua.h
- + src/threadpool.h
- src/util.h
- src/version.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/delly/-/compare/b4cfd0354fe8f35793a75232999399f8e847e291...62b7dff003c51f7e15cc658150b6717756ad11ec

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View it on GitLab: https://salsa.debian.org/med-team/delly/-/compare/b4cfd0354fe8f35793a75232999399f8e847e291...62b7dff003c51f7e15cc658150b6717756ad11ec
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