[med-svn] [Git][med-team/ncbi-blastplus][master] ncbi-blast+ 2.17.0+ds-6: Unbreak 64-bit builds.
Aaron M. Ucko (@ucko)
gitlab at salsa.debian.org
Fri Oct 17 16:28:46 BST 2025
Aaron M. Ucko pushed to branch master at Debian Med / ncbi-blastplus
Commits:
1de60835 by Aaron M. Ucko at 2025-10-17T11:26:20-04:00
ncbi-blast+ 2.17.0+ds-6: Unbreak 64-bit builds.
- - - - -
2 changed files:
- debian/changelog
- debian/patches/support_x32
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+ncbi-blast+ (2.17.0+ds-6) unstable; urgency=medium
+
+ * debian/patches/support_x32: Unbreak 64-bit builds.
+
+ -- Aaron M. Ucko <ucko at debian.org> Fri, 17 Oct 2025 11:26:19 -0400
+
ncbi-blast+ (2.17.0+ds-5) unstable; urgency=medium
* debian/patches/support_x32: Fix wgsread.cpp for 32-bit architectures.
=====================================
debian/patches/support_x32
=====================================
@@ -38,7 +38,7 @@ Avoid picking up wrong inline assembly.
if test -n "$with_vdb"; then
--- a/c++/src/sra/readers/sra/wgsread.cpp
+++ b/c++/src/sra/readers/sra/wgsread.cpp
-@@ -6185,7 +6185,8 @@ void CWGSSeqIterator::x_CreateFeaturesCh
+@@ -6185,9 +6185,10 @@ void CWGSSeqIterator::x_CreateFeaturesCh
// select range of feature table rows
auto range = GetLocFeatRowIdRange();
auto feat_start = range.first + kFeatPerChunk*index;
@@ -46,5 +46,8 @@ Avoid picking up wrong inline assembly.
+ auto feat_stop = min<TVDBRowId>(range.first+range.second,
+ feat_start+kFeatPerChunk);
range.first = feat_start;
- range.second = max(feat_start, feat_stop)-feat_start;
+- range.second = max(feat_start, feat_stop)-feat_start;
++ range.second = max<TVDBRowId>(feat_start, feat_stop)-feat_start;
// create features
+ info.chunk->SetData();
+ CSeq_annot::TData::TFtable* main_features = 0;
View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/1de60835a993d803c42a56a0acaa9bd26bb0a2b8
--
View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/1de60835a993d803c42a56a0acaa9bd26bb0a2b8
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