[med-svn] [Git][med-team/maffilter][master] 5 commits: Fix build using CMake 4 Closes: #1113263

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / maffilter


Commits:
b0e06c97 by Andreas Tille at 2025-10-18T21:35:48+02:00
Fix build using CMake 4 Closes: #1113263

- - - - -
213ee33f by Andreas Tille at 2025-10-18T21:40:56+02:00
d/watch: version=5

- - - - -
a8e68e10 by Andreas Tille at 2025-10-18T21:41:05+02:00
Standards-Version: 4.7.2 (routine-update)

- - - - -
0286e11b by Andreas Tille at 2025-10-18T21:41:15+02:00
debputy lint --auto-fix (routine-update)

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626670e5 by Andreas Tille at 2025-10-18T21:46:22+02:00
routine-update: Ready to upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/rules
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,13 @@
+maffilter (1.3.1+dfsg-7) unstable; urgency=medium
+
+  * Fix build using CMake 4
+    Closes: #1113263
+  * d/watch: version=5
+  * Standards-Version: 4.7.2 (routine-update)
+  * debputy lint --auto-fix (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Sat, 18 Oct 2025 21:41:16 +0200
+
 maffilter (1.3.1+dfsg-6) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -1,18 +1,20 @@
 Source: maffilter
+Standards-Version: 4.7.2
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>,
-           Julien Dutheil <julien.dutheil at univ-montp2.fr>,
-           Pranav Ballaney <ballaneypranav at gmail.com>
+Uploaders:
+ Andreas Tille <tille at debian.org>,
+ Julien Dutheil <julien.dutheil at univ-montp2.fr>,
+ Pranav Ballaney <ballaneypranav at gmail.com>,
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               cmake,
-               texinfo,
-               libbpp-phyl-omics-dev,
-               libboost-iostreams-dev,
-               zlib1g-dev,
-               libbz2-dev
-Standards-Version: 4.6.2
+Build-Depends:
+ debhelper-compat (= 13),
+ cmake,
+ texinfo,
+ libbpp-phyl-omics-dev,
+ libboost-iostreams-dev,
+ zlib1g-dev,
+ libbz2-dev,
 Vcs-Browser: https://salsa.debian.org/med-team/maffilter
 Vcs-Git: https://salsa.debian.org/med-team/maffilter.git
 Homepage: https://jydu.github.io/maffilter/
@@ -20,9 +22,11 @@ Rules-Requires-Root: no
 
 Package: maffilter
 Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Suggests: maffilter-examples
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
+Suggests:
+ maffilter-examples,
 Description: process genome alignment in the Multiple Alignment Format
  MafFilter applies a series of "filters" to a MAF file, in order to
  clean it, extract data and computer statistics while keeping track of
@@ -41,9 +45,11 @@ Description: process genome alignment in the Multiple Alignment Format
 
 Package: maffilter-examples
 Architecture: all
-Depends: ${misc:Depends}
-Enhances: maffilter
 Multi-Arch: foreign
+Depends:
+ ${misc:Depends},
+Enhances:
+ maffilter,
 Description: process genome alignment in the Multiple Alignment Format (example data)
  MafFilter applies a series of "filters" to a MAF file, in order to
  clean it, extract data and computer statistics while keeping track of


=====================================
debian/rules
=====================================
@@ -7,5 +7,8 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 %:
 	dh $@
 
+override_dh_auto_configure:
+	dh_auto_configure -- -DCMAKE_POLICY_VERSION_MINIMUM=3.5
+
 execute_after_dh_fixperms:
 	find debian/*/usr/share -name "*.bpp" -executable -exec chmod -x \{\} \;


=====================================
debian/watch
=====================================
@@ -1,4 +1,7 @@
-version=4
+Version: 5
 
-opts="repacksuffix=+dfsg,dversionmangle=auto,filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%" \
-  https://github.com/jydu/maffilter/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+Template: Github
+Owner: jydu
+Project: maffilter
+Repack-Suffix: +dfdg
+Dversion-Mangle: auto



View it on GitLab: https://salsa.debian.org/med-team/maffilter/-/compare/c6da936514d2218f143c40a9eee82b64f6469efd...626670e5cb16b45f464257b74ae51bf709358dd0

-- 
View it on GitLab: https://salsa.debian.org/med-team/maffilter/-/compare/c6da936514d2218f143c40a9eee82b64f6469efd...626670e5cb16b45f464257b74ae51bf709358dd0
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