[med-svn] [Git][med-team/ncbi-entrez-direct][master] 5 commits: Start work on ncbi-entrez-direct 24.0.20250523+dfsg-2.
Aaron M. Ucko (@ucko)
gitlab at salsa.debian.org
Mon Oct 20 16:04:03 BST 2025
Aaron M. Ucko pushed to branch master at Debian Med / ncbi-entrez-direct
Commits:
a98bae48 by Aaron M. Ucko at 2025-10-20T10:34:52-04:00
Start work on ncbi-entrez-direct 24.0.20250523+dfsg-2.
- - - - -
a9358045 by Aaron M. Ucko at 2025-10-20T10:35:59-04:00
d/rules: Cover github.com/gabriel-vasile/mimetype (#1118336)
... now needed by github.com/go-playground/validator/v10 (which is
itself a dependency of github.com/gin-gonic/gin).
- - - - -
59958e6a by Aaron M. Ucko at 2025-10-20T10:38:43-04:00
debian/rules: Relax /usr/share/gocode content assumptions.
Current indirect dependencies may be legitimately absent
for (potential) backports.
- - - - -
efae828f by Aaron M. Ucko at 2025-10-20T10:41:15-04:00
d/control: Reformat via "cme fix dpkg-control" (routine-update).
* Format potentially multi-valued entries as
Key:
value1,
value2,
...
rather then
Key: value1,
value2,
...
* Move Standards-Version up to between Source and Maintainer.
- - - - -
2faeefb6 by Aaron M. Ucko at 2025-10-20T11:02:43-04:00
Finalize ncbi-entrez-direct 24.0.20250523+dfsg-2 for unstable.
- - - - -
3 changed files:
- debian/changelog
- debian/control
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,15 @@
+ncbi-entrez-direct (24.0.20250523+dfsg-2) unstable; urgency=medium
+
+ * debian/control: Reformat via "cme fix dpkg-control" (routine-update).
+ * debian/rules:
+ - Add a symlink for github.com/gabriel-vasile/mimetype, now needed by
+ github.com/go-playground/validator/v10 (which is itself a dependency
+ of github.com/gin-gonic/gin). (Closes: #1118336.)
+ - Relax /usr/share/gocode content assumptions; current indirect
+ dependencies may be legitimately absent for (potential) backports.
+
+ -- Aaron M. Ucko <ucko at debian.org> Mon, 20 Oct 2025 10:42:25 -0400
+
ncbi-entrez-direct (24.0.20250523+dfsg-1) unstable; urgency=medium
* New upstream release; as with 19.0.20230216(+dfsg), the nominal major
=====================================
debian/control
=====================================
@@ -1,26 +1,28 @@
Source: ncbi-entrez-direct
+Standards-Version: 4.7.2
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Aaron M. Ucko <ucko at debian.org>
+Uploaders:
+ Aaron M. Ucko <ucko at debian.org>,
Section: science
Priority: optional
-Build-Depends: debhelper-compat (= 13),
- dh-golang,
- dh-python,
- golang-any,
- golang-github-dataence-porter2-dev,
- golang-github-fatih-color-dev,
- golang-github-gedex-inflector-dev,
- golang-github-gin-gonic-gin-dev,
- golang-github-goccy-go-yaml-dev,
- golang-github-klauspost-cpuid-dev,
- golang-github-klauspost-pgzip-dev,
- golang-github-komkom-toml-dev,
- golang-github-rainycape-unidecode-dev,
- golang-github-shirou-gopsutil-dev,
- golang-golang-x-net-dev,
- golang-golang-x-text-dev,
- python3
-Standards-Version: 4.7.2
+Build-Depends:
+ debhelper-compat (= 13),
+ dh-golang,
+ dh-python,
+ golang-any,
+ golang-github-dataence-porter2-dev,
+ golang-github-fatih-color-dev,
+ golang-github-gedex-inflector-dev,
+ golang-github-gin-gonic-gin-dev,
+ golang-github-goccy-go-yaml-dev,
+ golang-github-klauspost-cpuid-dev,
+ golang-github-klauspost-pgzip-dev,
+ golang-github-komkom-toml-dev,
+ golang-github-rainycape-unidecode-dev,
+ golang-github-shirou-gopsutil-dev,
+ golang-golang-x-net-dev,
+ golang-golang-x-text-dev,
+ python3,
Vcs-Browser: https://salsa.debian.org/med-team/ncbi-entrez-direct
Vcs-Git: https://salsa.debian.org/med-team/ncbi-entrez-direct.git
Homepage: http://www.ncbi.nlm.nih.gov/books/NBK179288
@@ -30,17 +32,21 @@ XS-Go-Import-Path: ncbi.nlm.nih.gov/edirect
Package: ncbi-entrez-direct
Architecture: any
Multi-Arch: foreign
-Depends: curl | wget,
- ${misc:Depends},
- ${shlibs:Depends}
-Recommends: ${python3:Depends}
-Suggests: curl,
- golang-any,
- libxml-simple-perl,
- libxml2-utils,
- unzip,
- ${perl:Depends}
-Built-Using: ${misc:Built-Using}
+Depends:
+ curl | wget,
+ ${misc:Depends},
+ ${shlibs:Depends},
+Recommends:
+ ${python3:Depends},
+Suggests:
+ curl,
+ golang-any,
+ libxml-simple-perl,
+ libxml2-utils,
+ unzip,
+ ${perl:Depends},
+Built-Using:
+ ${misc:Built-Using},
Description: NCBI Entrez utilities on the command line
Entrez Direct (EDirect) is an advanced method for accessing NCBI's set
of interconnected databases (publication, sequence, structure, gene,
=====================================
debian/rules
=====================================
@@ -51,8 +51,8 @@ FIX_PERL_SHEBANG = 1s,^\#!/usr/bin/env perl$$,\#!/usr/bin/perl,
GOCODE = /usr/share/gocode
GH = github.com
GL = golang.org
-GOLIBSRC_ = $(GH)/fatih/color $(GH)/gedex/inflector \
- $(GH)/gin-contrib/sse $(GH)/gin-gonic/gin \
+GOLIBSRC_ = $(GH)/fatih/color $(GH)/gabriel-vasile/mimetype \
+ $(GH)/gedex/inflector $(GH)/gin-contrib/sse $(GH)/gin-gonic/gin \
$(GH)/go-playground/locales \
$(GH)/go-playground/universal-translator \
$(GH)/go-playground/validator/v10 $(GH)/goccy/go-yaml \
@@ -83,9 +83,9 @@ endif
USE_LIB_DIR = s,\"$$pth\(\"*\)/,\"$(LIB_DIR)\1/,g
-$(GOPATH)/%: /usr/share/gocode/%
+$(GOPATH)/%: # /usr/share/gocode/%
mkdir -p $(dir $@)
- ln -s $< $@
+ ln -s /usr/share/gocode/$* $@
$(GOPATH)/src/eutils:
mkdir -p $(GOPATH)/src
View it on GitLab: https://salsa.debian.org/med-team/ncbi-entrez-direct/-/compare/c627bfbbb1ce6d7958f078d2820c1b30d92f12c3...2faeefb6ec96780a49619659bf0dfd0e578db02b
--
View it on GitLab: https://salsa.debian.org/med-team/ncbi-entrez-direct/-/compare/c627bfbbb1ce6d7958f078d2820c1b30d92f12c3...2faeefb6ec96780a49619659bf0dfd0e578db02b
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