[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Thu Sep 18 02:42:19 BST 2025



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
da6a51df by Andreas Tille at 2025-09-18T01:42:14+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
+Last-Update: Thu, 18 Sep 2025 01:42:03 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -8,7 +8,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  adun.app                      |     15 | {bio}                                      | 
  biojava-live                  |     14 | {bio-dev}                                  | 
  jebl2                         |     12 | {bio-dev}                                  | 
- oscar                         |     12 | {tools,data,practice}                      | 
+ oscar                         |     12 | {practice,data,tools}                      | 
  orthanc-mysql                 |     11 | {imaging}                                  | 
  sight                         |     11 | {imaging}                                  | 
  gnumed-server                 |     10 | {covid-19,practice}                        | 
@@ -28,7 +28,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  tracetuner                    |      6 | {bio}                                      | 
  biojava6-live                 |      5 | {bio-dev}                                  | 
  brig                          |      5 | {bio}                                      | 
- embassy-domalign              |      5 | {cloud,bio}                                | 
+ embassy-domalign              |      5 | {bio,cloud}                                | 
  fastml                        |      5 | {bio}                                      | 
  libdivsufsort                 |      5 | {bio-dev}                                  | 
  cmtk                          |      4 | {imaging}                                  | 
@@ -51,8 +51,8 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  sga                           |      4 | {bio}                                      | 
  sprai                         |      4 | {bio}                                      | 
  spread-phy                    |      4 | {bio,bio-phylogeny}                        | 
- thesias                       |      4 | {covid-19,bio}                             | 
- treeview                      |      4 | {bio-phylogeny,bio}                        | 
+ thesias                       |      4 | {bio,covid-19}                             | 
+ treeview                      |      4 | {bio,bio-phylogeny}                        | 
  getdata                       |      3 | {bio}                                      | 
  htscodecs                     |      3 | {covid-19,bio-dev}                         | 
  insighttoolkit5               |      3 | {imaging-dev}                              | 
@@ -63,10 +63,10 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  librg-utils-perl              |      3 | {bio}                                      | 
  malt                          |      3 | {bio}                                      | 
  megan-ce                      |      3 | {bio}                                      | 
- mhap                          |      3 | {bio,bio-ngs}                              | 
+ mhap                          |      3 | {bio-ngs,bio}                              | 
  pigx-rnaseq                   |      3 | {covid-19,bio}                             | 
  placnet                       |      3 | {bio}                                      | 
- plasmidid                     |      3 | {covid-19,bio}                             | 
+ plasmidid                     |      3 | {bio,covid-19}                             | 
  plasmidseeker                 |      3 | {bio}                                      | 
  qcumber                       |      3 | {bio}                                      | 
  rdp-alignment                 |      3 | {bio}                                      | 
@@ -108,7 +108,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  blimps                        |      1 | {bio}                                      | 
  cufflinks                     |      1 | {cloud,bio}                                | 
  emboss-explorer               |      1 | {bio}                                      | 
- jmodeltest                    |      1 | {bio-phylogeny,bio}                        | 
+ jmodeltest                    |      1 | {bio,bio-phylogeny}                        | 
  libseqlib                     |      1 | {bio-dev}                                  | 
  opencfu                       |      1 | {laboratory}                               | 
  papyrus                       |      1 | {imaging-dev}                              | 
@@ -136,7 +136,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  metastudent-data              |      0 | {bio}                                      | 
  metastudent-data-2            |      0 | {bio}                                      | 
  mia                           |      0 | {imaging-dev}                              | 
- milib                         |      0 | {covid-19,bio-dev}                         | 
+ milib                         |      0 | {bio-dev,covid-19}                         | 
  mssstest                      |      0 | {tools}                                    | 
  orthanc-imagej                |      0 | {imaging}                                  | 
  pbseqlib                      |      0 | {bio-dev}                                  | 
@@ -149,13 +149,13 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  sbmltoolbox                   |      0 | {bio-dev}                                  | 
  sift                          |      0 | {bio}                                      | 
  sight                         |      0 | {imaging-dev}                              | 
- smrtanalysis                  |      0 | {covid-19,bio}                             | 
+ smrtanalysis                  |      0 | {bio,covid-19}                             | 
  srf                           |      0 | {bio-dev}                                  | 
  varscan                       |      0 | {covid-19,bio}                             | 
  vienna-rna                    |      0 | {covid-19,bio}                             | 
  xdffileio                     |      0 | {imaging-dev}                              | 
  xxsds-dynamic                 |      0 | {bio-dev}                                  | 
  sideretro                     |     -1 | {bio}                                      | 
- tipp                          |     -1 | {covid-19,bio}                             | 
+ tipp                          |     -1 | {bio,covid-19}                             | 
 (180 rows)
 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
+Last-Update: Thu, 18 Sep 2025 01:42:04 +0000
 
        Source                              | Vote   |             Tasks                                                   |                        Tags                         
 -------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------
@@ -16,44 +16,44 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  ntl                                       |     45 | {mathematics-dev}                                                   | 
  ppl                                       |     37 | {numericalcomputation}                                              | 
  pyzo                                      |     36 | {numericalcomputation}                                              | 
- refmac-dictionary                         |     36 | {chemistry,highenergy-physics-dev}                                  | 
+ refmac-dictionary                         |     36 | {highenergy-physics-dev,chemistry}                                  | 
  setzer                                    |     36 | {typesetting}                                                       | 
  guiqwt                                    |     32 | {numericalcomputation,viewing}                                      | 
  sketch                                    |     29 | {typesetting}                                                       | 
- lxi-tools                                 |     27 | {dataacquisition,engineering}                                       | 
+ lxi-tools                                 |     27 | {engineering,dataacquisition}                                       | 
  teem                                      |     27 | {imageanalysis}                                                     | 
  muparser                                  |     26 | {mathematics-dev}                                                   | 
  libm4ri                                   |     25 | {mathematics-dev}                                                   | 
  libmatio                                  |     25 | {mathematics-dev}                                                   | 
  arduino-mk                                |     24 | {robotics}                                                          | 
  feedgnuplot                               |     23 | {viewing}                                                           | 
- fftw                                      |     23 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
- flann                                     |     23 | {engineering-dev,mathematics-dev}                                   | 
+ fftw                                      |     23 | {mathematics-dev,physics-dev,meteorology-dev}                       | 
+ flann                                     |     23 | {mathematics-dev,engineering-dev}                                   | 
  flintqs                                   |     23 | {mathematics}                                                       | 
- coinor-symphony                           |     22 | {logic,numericalcomputation,mathematics}                            | 
+ coinor-symphony                           |     22 | {logic,mathematics,numericalcomputation}                            | 
  geg                                       |     22 | {viewing}                                                           | 
  xygrib                                    |     22 | {meteorology}                                                       | 
  cliquer                                   |     21 | {mathematics-dev}                                                   | 
  libhomfly                                 |     21 | {mathematics-dev}                                                   | 
- python-escript                            |     21 | {numericalcomputation,engineering,simulations}                      | 
+ python-escript                            |     21 | {numericalcomputation,simulations,engineering}                      | 
  iml                                       |     20 | {mathematics-dev}                                                   | 
  sardana                                   |     19 | {dataacquisition}                                                   | 
  sat4j                                     |     19 | {logic}                                                             | 
  apophenia                                 |     18 | {statistics}                                                        | 
  persalys                                  |     18 | {engineering,statistics,mathematics}                                | 
  cliquer                                   |     16 | {mathematics}                                                       | 
- debian-science                            |     15 | {economics,nanoscale-physics,mathematics,machine-learning,physics}  | 
+ debian-science                            |     15 | {economics,nanoscale-physics,machine-learning,physics,mathematics}  | 
  dune-uggrid                               |     15 | {mathematics-dev}                                                   | 
  getdp                                     |     15 | {engineering,mathematics,simulations}                               | 
  grads                                     |     15 | {meteorology}                                                       | 
  gts                                       |     15 | {viewing-dev}                                                       | 
  picosat                                   |     15 | {logic}                                                             | 
- toulbar2                                  |     15 | {logic,mathematics,numericalcomputation,physics}                    | 
+ toulbar2                                  |     15 | {logic,numericalcomputation,mathematics,physics}                    | 
  jeuclid                                   |     14 | {viewing,typesetting}                                               | 
- persalys                                  |     14 | {engineering,statistics,mathematics}                                | 
+ persalys                                  |     14 | {statistics,mathematics,engineering}                                | 
  psurface                                  |     14 | {numericalcomputation}                                              | 
- debian-science                            |     13 | {economics,nanoscale-physics,machine-learning,physics}              | 
- debian-science                            |     13 | {machine-learning,neuroscience-cognitive}                           | 
+ debian-science                            |     13 | {neuroscience-cognitive,machine-learning}                           | 
+ debian-science                            |     13 | {physics,machine-learning,economics,nanoscale-physics}              | 
  eccodes                                   |     13 | {meteorology,meteorology-dev}                                       | 
  lrcalc                                    |     13 | {mathematics-dev}                                                   | 
  bossa                                     |     12 | {devices}                                                           | 
@@ -68,11 +68,11 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  sdpb                                      |     12 | {numericalcomputation,highenergy-physics}                           | 
  alberta                                   |     11 | {engineering-dev}                                                   | 
  debian-science                            |     11 | {electrophysiology}                                                 | 
- matlab-support                            |     11 | {numericalcomputation,mathematics}                                  | 
+ matlab-support                            |     11 | {mathematics,numericalcomputation}                                  | 
  pcl                                       |     11 | {robotics-dev}                                                      | 
  libzn-poly                                |     10 | {mathematics-dev}                                                   | 
  mseed2sac                                 |     10 | {dataacquisition-dev}                                               | 
- libitpp                                   |      9 | {engineering-dev,mathematics-dev}                                   | 
+ libitpp                                   |      9 | {mathematics-dev,engineering-dev}                                   | 
  opencascade                               |      9 | {simulations}                                                       | 
  python-cdo                                |      9 | {meteorology}                                                       | 
  ros-rosconsole                            |      9 | {robotics-dev}                                                      | 
@@ -87,22 +87,22 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  urdfdom-headers                           |      8 | {robotics-dev}                                                      | 
  hdf-eos5                                  |      7 | {meteorology-dev}                                                   | 
  libccp4                                   |      7 | {nanoscale-physics-dev}                                             | 
- libvigraimpex                             |      7 | {machine-learning,imageanalysis-dev}                                | 
+ libvigraimpex                             |      7 | {imageanalysis-dev,machine-learning}                                | 
  magics++                                  |      7 | {meteorology-dev}                                                   | 
  odc                                       |      7 | {meteorology-dev}                                                   | 
  odc                                       |      7 | {meteorology}                                                       | 
  ratpoints                                 |      7 | {mathematics-dev}                                                   | 
- rubiks                                    |      7 | {mathematics,geometry}                                              | 
+ rubiks                                    |      7 | {geometry,mathematics}                                              | 
  toon                                      |      7 | {numericalcomputation}                                              | 
  uctodata                                  |      7 | {linguistics}                                                       | 
  auto-07p                                  |      6 | {mathematics}                                                       | 
  coda                                      |      6 | {meteorology-dev}                                                   | 
- etsf-io                                   |      6 | {nanoscale-physics,physics}                                         | 
- fftw                                      |      6 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
+ etsf-io                                   |      6 | {physics,nanoscale-physics}                                         | 
+ fftw                                      |      6 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
  hdf-eos4                                  |      6 | {meteorology-dev}                                                   | 
  hpcc                                      |      6 | {numericalcomputation,distributedcomputing}                         | 
  libcvd                                    |      6 | {imageanalysis-dev}                                                 | 
- libgtkdatabox                             |      6 | {viewing-dev,engineering-dev}                                       | 
+ libgtkdatabox                             |      6 | {engineering-dev,viewing-dev}                                       | 
  liblxi                                    |      6 | {engineering-dev,dataacquisition-dev}                               | 
  ucto                                      |      6 | {linguistics}                                                       | 
  coda                                      |      5 | {meteorology}                                                       | 
@@ -115,8 +115,8 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  veccore                                   |      5 | {mathematics-dev}                                                   | 
  vlfeat                                    |      5 | {imageanalysis-dev}                                                 | 
  clipper                                   |      4 | {nanoscale-physics-dev}                                             | 
- coinmp                                    |      4 | {logic,numericalcomputation,mathematics-dev}                        | 
- debian-science                            |      4 | {economics,nanoscale-physics,statistics,physics}                    | 
+ coinmp                                    |      4 | {logic,mathematics-dev,numericalcomputation}                        | 
+ debian-science                            |      4 | {nanoscale-physics,statistics,economics,physics}                    | 
  dimbl                                     |      4 | {linguistics}                                                       | 
  form                                      |      4 | {mathematics}                                                       | 
  gsw                                       |      4 | {meteorology}                                                       | 
@@ -165,20 +165,20 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  metview                                   |      2 | {meteorology}                                                       | 
  mpi4py-fft                                |      2 | {mathematics-dev}                                                   | 
  ncrystal                                  |      2 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
- neartree                                  |      2 | {numericalcomputation,mathematics-dev}                              | 
+ neartree                                  |      2 | {mathematics-dev,numericalcomputation}                              | 
  openmesh                                  |      2 | {mathematics-dev}                                                   | 
  psurface                                  |      2 | {numericalcomputation}                                              | 
  qd                                        |      2 | {mathematics-dev}                                                   | 
  scram                                     |      2 | {engineering}                                                       | 
  silo-llnl                                 |      2 | {engineering}                                                       | 
- spfft                                     |      2 | {nanoscale-physics-dev,meteorology-dev,physics-dev,mathematics-dev} | 
- trilinos                                  |      2 | {engineering-dev,physics-dev,mathematics-dev}                       | 
+ spfft                                     |      2 | {mathematics-dev,nanoscale-physics-dev,physics-dev,meteorology-dev} | 
+ trilinos                                  |      2 | {physics-dev,mathematics-dev,engineering-dev}                       | 
  xppaut                                    |      2 | {neuroscience-modeling}                                             | 
  apache-opennlp                            |      1 | {linguistics}                                                       | 
  apriltag                                  |      1 | {robotics-dev}                                                      | 
  atlas-ecmwf                               |      1 | {meteorology-dev}                                                   | 
  ckon                                      |      1 | {highenergy-physics-dev}                                            | 
- code-saturne                              |      1 | {engineering-dev,mathematics-dev}                                   | 
+ code-saturne                              |      1 | {mathematics-dev,engineering-dev}                                   | 
  cqrlib                                    |      1 | {mathematics-dev}                                                   | 
  cvector                                   |      1 | {mathematics-dev}                                                   | 
  debian-science                            |      1 | {nanoscale-physics-dev}                                             | 
@@ -192,7 +192,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  libquantum                                |      1 | {numericalcomputation}                                              | 
  looptools                                 |      1 | {highenergy-physics-dev}                                            | 
  looptools                                 |      1 | {highenergy-physics}                                                | 
- magma                                     |      1 | {numericalcomputation,mathematics-dev}                              | 
+ magma                                     |      1 | {mathematics-dev,numericalcomputation}                              | 
  mbtserver                                 |      1 | {linguistics}                                                       | 
  metis-edf                                 |      1 | {engineering,numericalcomputation}                                  | 
  metkit                                    |      1 | {meteorology-dev}                                                   | 
@@ -215,7 +215,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
  asl                                       |      0 | {physics-dev}                                                       | 
- calculix-ccx-test                         |      0 | {numericalcomputation,engineering,simulations}                      | 
+ calculix-ccx-test                         |      0 | {simulations,numericalcomputation,engineering}                      | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
  cmor                                      |      0 | {meteorology-dev}                                                   | 
  coda                                      |      0 | {meteorology-dev}                                                   | 
@@ -241,7 +241,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  metis-edf                                 |      0 | {engineering-dev}                                                   | 
  opengv                                    |      0 | {geometry}                                                          | 
  openigtlink                               |      0 | {robotics-dev}                                                      | 
- python-escript                            |      0 | {numericalcomputation,engineering,simulations}                      | 
+ python-escript                            |      0 | {numericalcomputation,simulations,engineering}                      | 
  python-opcodes                            |      0 | {tools}                                                             | 
  qrupdate                                  |      0 | {mathematics-dev}                                                   | 
  robot-testing-framework                   |      0 | {robotics-dev}                                                      | 
@@ -252,7 +252,7 @@ Last-Update: Wed, 17 Sep 2025 13:42:04 +0000
  sagemath-database-elliptic-curves         |      0 | {mathematics}                                                       | 
  sagemath-database-graphs                  |      0 | {mathematics}                                                       | 
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
- schroedinger-maeparser                    |      0 | {nanoscale-physics-dev,chemistry}                                   | 
+ schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
  slicot                                    |      0 | {robotics-dev,engineering-dev}                                      | 
  ssm                                       |      0 | {nanoscale-physics}                                                 | 


=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 17 Sep 2025 13:42:05 +0000
+Last-Update: Thu, 18 Sep 2025 01:42:05 +0000
 
 
  source                        |   id    | severity  |                                                                                                                                                                                                 title                                                                                                                                                                                                  


=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 17 Sep 2025 13:42:05 +0000
+Last-Update: Thu, 18 Sep 2025 01:42:04 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/da6a51dff52a0d3dcf91550d9b6f83990f62dbff

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