[med-svn] [Git][med-team/libbpp-popgen][master] 9 commits: cmake-4.patch: bump cmake minimum required to 3.10.
Étienne Mollier (@emollier)
gitlab at salsa.debian.org
Mon Sep 29 20:55:48 BST 2025
Étienne Mollier pushed to branch master at Debian Med / libbpp-popgen
Commits:
fd794464 by Étienne Mollier at 2025-09-29T21:40:17+02:00
cmake-4.patch: bump cmake minimum required to 3.10.
Closes: #1113118
- - - - -
9e595597 by Étienne Mollier at 2025-09-29T21:41:13+02:00
d/copyright: remove the old FSF address.
- - - - -
5413c2ac by Étienne Mollier at 2025-09-29T21:41:55+02:00
d/*lintian-overrides: override the Conflicts with version.
This configuration is wanted in the t64 transition context.
- - - - -
a30de02b by Étienne Mollier at 2025-09-29T21:43:05+02:00
d/watch: bump to v5 Github template.
- - - - -
9bb21cd0 by Étienne Mollier at 2025-09-29T21:45:23+02:00
d/*lintian-overrides: remove unused override.
- - - - -
a2224e7d by Étienne Mollier at 2025-09-29T21:45:43+02:00
d/control: remove redundant Rules-Requires-Root: no.
- - - - -
4ae27fef by Étienne Mollier at 2025-09-29T21:46:03+02:00
d/control: declare compliance to standards version 4.7.2.
- - - - -
c435d42a by Étienne Mollier at 2025-09-29T21:46:41+02:00
d/s/lintian-overrides: glob the line count of d/control.
This stabilises the override when the d/control varies.
- - - - -
cd00a0cf by Étienne Mollier at 2025-09-29T21:55:20+02:00
d/changelog: ready for upload to unstable.
- - - - -
8 changed files:
- debian/changelog
- debian/control
- debian/copyright
- debian/libbpp-popgen8t64.lintian-overrides
- + debian/patches/cmake-4.patch
- debian/patches/series
- debian/source/lintian-overrides
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,19 @@
+libbpp-popgen (2.4.1-12) unstable; urgency=medium
+
+ * Team upload.
+ * cmake-4.patch: bump cmake minimum required to 3.10. (Closes: #1113118)
+ * d/copyright: remove the old FSF address.
+ * d/*lintian-overrides: override the Conflicts with version.
+ This configuration is wanted in the t64 transition context.
+ * d/watch: bump to v5 Github template.
+ * d/*lintian-overrides: remove unused override.
+ * d/control: remove redundant Rules-Requires-Root: no.
+ * d/control: declare compliance to standards version 4.7.2.
+ * d/s/lintian-overrides: glob the line count of d/control.
+ This stabilises the override when the d/control varies.
+
+ -- Étienne Mollier <emollier at debian.org> Mon, 29 Sep 2025 21:47:36 +0200
+
libbpp-popgen (2.4.1-11) unstable; urgency=medium
* Since every GCC version bump ends up in a bug caused by the need to
=====================================
debian/control
=====================================
@@ -9,11 +9,10 @@ Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
d-shlibs (>= 0.106~),
libbpp-core-dev,
libbpp-seq-dev
-Standards-Version: 4.7.0
+Standards-Version: 4.7.2
Vcs-Browser: https://salsa.debian.org/med-team/libbpp-popgen
Vcs-Git: https://salsa.debian.org/med-team/libbpp-popgen.git
Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
-Rules-Requires-Root: no
Package: libbpp-popgen-dev
Architecture: any
=====================================
debian/copyright
=====================================
@@ -24,10 +24,6 @@ License: GPL-2+
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License
- along with this package; if not, write to the Free Software
- Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
.
On Debian systems, the complete text of the GNU General
Public License can be found in `/usr/share/common-licenses/GPL-2'.
=====================================
debian/libbpp-popgen8t64.lintian-overrides
=====================================
@@ -1,2 +1,2 @@
-libbpp-popgen8t64: package-name-doesnt-match-sonames libbpp-popgen8
libbpp-popgen8t64: no-symbols-control-file
+libbpp-popgen8t64: conflicts-with-version libbpp-popgen8 (<< *)
=====================================
debian/patches/cmake-4.patch
=====================================
@@ -0,0 +1,19 @@
+Description: bump cmake minimum required to 3.10.
+ This fixes errors and warnings caused by the bump to cmake 4.
+Author: Étienne Mollier <emollier at debian.org>
+Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1113118
+Forwarded: no
+Last-Update: 2025-09-29
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- libbpp-popgen.orig/CMakeLists.txt
++++ libbpp-popgen/CMakeLists.txt
+@@ -5,7 +5,7 @@
+ # Francois Gindraud (2017)
+ # Created: 21/08/2009
+
+-cmake_minimum_required (VERSION 2.8.11)
++cmake_minimum_required (VERSION 3.10)
+ project (bpp-popgen CXX)
+
+ # Compile options
=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
unforce-cxxflags.patch
spelling
+cmake-4.patch
=====================================
debian/source/lintian-overrides
=====================================
@@ -1,2 +1,2 @@
# false positive from the t64 transition
-libbpp-popgen source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-popgen8t64 -> libbpp-popgen8 [debian/control:38]
+libbpp-popgen source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-popgen8t64 -> libbpp-popgen8 [debian/control:*]
=====================================
debian/watch
=====================================
@@ -1,4 +1,5 @@
-version=4
+Version: 5
-opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%" \
- https://github.com/BioPP/bpp-popgen/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+Template: Github
+Owner: BioPP
+Project: bpp-popgen
View it on GitLab: https://salsa.debian.org/med-team/libbpp-popgen/-/compare/297b30c7f0e08d88f5dd7b49f82b94dec9c87eea...cd00a0cf8ecdfc65909687038568c1979af9686a
--
View it on GitLab: https://salsa.debian.org/med-team/libbpp-popgen/-/compare/297b30c7f0e08d88f5dd7b49f82b94dec9c87eea...cd00a0cf8ecdfc65909687038568c1979af9686a
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