[med-svn] [Git][med-team/libbpp-seq][master] 7 commits: cmake-4.patch: new: bump cmake requirement to 3.10.
Étienne Mollier (@emollier)
gitlab at salsa.debian.org
Mon Sep 29 21:58:39 BST 2025
Étienne Mollier pushed to branch master at Debian Med / libbpp-seq
Commits:
2670c366 by Étienne Mollier at 2025-09-29T22:54:13+02:00
cmake-4.patch: new: bump cmake requirement to 3.10.
Closes: #1113121
- - - - -
8d997d43 by Étienne Mollier at 2025-09-29T22:55:09+02:00
d/control: declare standards compliance to version 4.7.2.
- - - - -
d61a068f by Étienne Mollier at 2025-09-29T22:55:29+02:00
d/copyright: remove the old FSF address.
- - - - -
ad28fec8 by Étienne Mollier at 2025-09-29T22:55:48+02:00
d/watch: bump to v5 Github template.
- - - - -
074fe783 by Étienne Mollier at 2025-09-29T22:56:06+02:00
d/*lintian-overrides: remove unused soname override.
- - - - -
9b70d047 by Étienne Mollier at 2025-09-29T22:56:24+02:00
d/s/lintian-overrides: glob d/control line number.
This stabilises the override match when d/control varies.
- - - - -
9c634116 by Étienne Mollier at 2025-09-29T22:58:14+02:00
d/changelog: ready for upload to unstable.
- - - - -
8 changed files:
- debian/changelog
- debian/control
- debian/copyright
- debian/libbpp-seq12t64.lintian-overrides
- + debian/patches/cmake-4.patch
- debian/patches/series
- debian/source/lintian-overrides
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,16 @@
+libbpp-seq (2.4.1-14) unstable; urgency=medium
+
+ * Team upload.
+ * cmake-4.patch: new: bump cmake requirement to 3.10. (Closes: #1113121)
+ * d/control: declare standards compliance to version 4.7.2.
+ * d/copyright: remove the old FSF address.
+ * d/watch: bump to v5 Github template.
+ * d/*lintian-overrides: remove unused soname override.
+ * d/s/lintian-overrides: glob d/control line number.
+ This stabilises the override match when d/control varies.
+
+ -- Étienne Mollier <emollier at debian.org> Mon, 29 Sep 2025 22:57:54 +0200
+
libbpp-seq (2.4.1-13) unstable; urgency=medium
* Since every GCC version bump ends up in a bug caused by the need to
=====================================
debian/control
=====================================
@@ -8,7 +8,7 @@ Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
cmake,
d-shlibs (>= 0.106~),
libbpp-core-dev
-Standards-Version: 4.7.0
+Standards-Version: 4.7.2
Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq
Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq.git
Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
=====================================
debian/copyright
=====================================
@@ -24,10 +24,6 @@ License: GPL-2+
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License
- along with this package; if not, write to the Free Software
- Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
.
On Debian systems, the complete text of the GNU General
Public License can be found in `/usr/share/common-licenses/GPL-2'.
=====================================
debian/libbpp-seq12t64.lintian-overrides
=====================================
@@ -1,3 +1,2 @@
-libbpp-seq12t64: package-name-doesnt-match-sonames libbpp-seq12
libbpp-seq12t64: conflicts-with-version
libbpp-seq12t64: no-symbols-control-file
=====================================
debian/patches/cmake-4.patch
=====================================
@@ -0,0 +1,19 @@
+Description: bump cmake_minimum_requirement to 3.10.
+ This resolves errors and warnings with cmake 4.
+Author: Étienne Mollier <emollier at debian.org>
+Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1113121
+Forwarded: no
+Last-Update: 2025-09-29
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- libbpp-seq.orig/CMakeLists.txt
++++ libbpp-seq/CMakeLists.txt
+@@ -5,7 +5,7 @@
+ # Francois Gindraud (2017)
+ # Created: 20/08/2009
+
+-cmake_minimum_required (VERSION 2.8.11)
++cmake_minimum_required (VERSION 3.10)
+ project (bpp-seq CXX)
+
+ # Compile options
=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
unforce-cxxflags.patch
spelling
+cmake-4.patch
=====================================
debian/source/lintian-overrides
=====================================
@@ -1,3 +1,3 @@
# This is a false positive since formerly libbpp-seq12 was build by this
-libbpp-seq source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-seq12t64 -> libbpp-seq12 [debian/control:37]
+libbpp-seq source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-seq12t64 -> libbpp-seq12 [debian/control:*]
=====================================
debian/watch
=====================================
@@ -1,4 +1,5 @@
-version=4
+Version: 5
-opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%" \
- https://github.com/BioPP/bpp-seq/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+Template: Github
+Owner: BioPP
+Project: bpp-seq
View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq/-/compare/fb5aba35cadc233ef0f0774f1e1af5e60b09255d...9c634116ceae5ee749c202a3e853c259689a941f
--
View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq/-/compare/fb5aba35cadc233ef0f0774f1e1af5e60b09255d...9c634116ceae5ee749c202a3e853c259689a941f
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