Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
afe5c977 by Andreas Tille at 2026-04-05T01:42:26+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
+Last-Update: Sun, 05 Apr 2026 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -9,26 +9,26 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
gnumed-server | 16 | {covid-19,practice} |
adun.app | 15 | {bio} |
orthanc-gdcm | 14 | {imaging} |
- oscar | 14 | {tools,practice,data} |
+ oscar | 14 | {data,practice,tools} |
sight | 13 | {imaging} |
mrtrix3 | 12 | {imaging} |
- bio-tradis | 11 | {bio,bio-dev} |
+ bio-tradis | 11 | {bio-dev,bio} |
orthanc-mysql | 11 | {imaging} |
saint | 11 | {bio} |
surpyvor | 11 | {bio} |
beast-mcmc | 10 | {bio,bio-phylogeny} |
- dextractor | 10 | {bio,covid-19} |
+ dextractor | 10 | {covid-19,bio} |
embassy-domalign | 10 | {cloud,bio} |
libdivsufsort | 10 | {bio-dev} |
- melting | 10 | {bio,cloud} |
+ melting | 10 | {cloud,bio} |
orthanc-postgresql | 10 | {imaging} |
- treeview | 10 | {bio-phylogeny,bio} |
+ treeview | 10 | {bio,bio-phylogeny} |
biojava6-live | 9 | {bio-dev} |
embassy-domainatrix | 9 | {cloud,bio} |
- phyutility | 9 | {cloud,bio} |
+ phyutility | 9 | {bio,cloud} |
piler | 9 | {bio} |
pixelmed | 9 | {imaging} |
- proalign | 9 | {bio,bio-phylogeny} |
+ proalign | 9 | {bio-phylogeny,bio} |
rdp-alignment | 9 | {bio} |
fastml | 8 | {bio} |
heudiconv | 8 | {imaging} |
@@ -42,23 +42,23 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
sga | 8 | {bio} |
sibsim4 | 8 | {bio,cloud} |
spread-phy | 8 | {bio,bio-phylogeny} |
- thesias | 8 | {covid-19,bio} |
+ thesias | 8 | {bio,covid-19} |
tracetuner | 8 | {bio} |
bart-view | 7 | {imaging} |
brig | 7 | {bio} |
- embassy-domsearch | 7 | {cloud,bio} |
+ embassy-domsearch | 7 | {bio,cloud} |
kmerresistance | 7 | {bio} |
libjloda-java | 7 | {bio-dev} |
malt | 7 | {bio} |
megan-ce | 7 | {bio} |
mhap | 7 | {bio-ngs,bio} |
- plasmidid | 7 | {bio,covid-19} |
+ plasmidid | 7 | {covid-19,bio} |
savvy | 7 | {bio} |
soapsnp | 7 | {bio} |
sprai | 7 | {bio} |
suitename | 7 | {bio} |
surankco | 7 | {bio} |
- tophat-recondition | 7 | {bio,covid-19} |
+ tophat-recondition | 7 | {covid-19,bio} |
ctffind | 6 | {bio} |
libpal-java | 6 | {bio-dev} |
pigx-rnaseq | 6 | {bio,covid-19} |
@@ -98,9 +98,9 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
pbcopper | 2 | {bio-dev} |
pbseqlib | 2 | {bio-dev} |
acedb | 1 | {bio,cloud} |
- cufflinks | 1 | {bio,cloud} |
+ cufflinks | 1 | {cloud,bio} |
emboss-explorer | 1 | {bio} |
- jmodeltest | 1 | {bio,bio-phylogeny} |
+ jmodeltest | 1 | {bio-phylogeny,bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
librdp-taxonomy-tree-java | 1 | {bio-dev} |
libseqlib | 1 | {bio-dev} |
@@ -119,7 +119,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
gatk-fermilite | 0 | {bio-dev} |
libbioparser-dev | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
@@ -128,12 +128,12 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
maxflow | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
savvy | 0 | {bio-dev} |
@@ -141,12 +141,12 @@ Last-Update: Sat, 04 Apr 2026 13:42:04 +0000
sift | 0 | {bio} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
- varscan | 0 | {covid-19,bio} |
- vienna-rna | 0 | {bio,covid-19} |
+ varscan | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
sight | -1 | {imaging-dev} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(170 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
+Last-Update: Sun, 05 Apr 2026 01:42:05 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------
@@ -15,13 +15,13 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
giac | 70 | {mathematics} |
imview | 55 | {viewing} |
pyzo | 54 | {numericalcomputation} |
- guiqwt | 47 | {numericalcomputation,viewing} |
+ guiqwt | 47 | {viewing,numericalcomputation} |
setzer | 44 | {typesetting} |
muparser | 42 | {mathematics-dev} |
- persalys | 38 | {statistics,mathematics,engineering} |
+ persalys | 38 | {engineering,statistics,mathematics} |
ntl | 35 | {mathematics-dev} |
palp | 35 | {mathematics} |
- lxi-tools | 34 | {dataacquisition,engineering} |
+ lxi-tools | 34 | {engineering,dataacquisition} |
sardana | 34 | {dataacquisition} |
teem | 33 | {imageanalysis} |
apophenia | 32 | {statistics} |
@@ -29,44 +29,44 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
arduino-mk | 30 | {robotics} |
sketch | 30 | {typesetting} |
ppl | 28 | {numericalcomputation} |
- debian-science | 27 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
- coinor-symphony | 26 | {logic,mathematics,numericalcomputation} |
+ debian-science | 27 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
+ coinor-symphony | 26 | {numericalcomputation,logic,mathematics} |
colpack | 26 | {numericalcomputation} |
- getdp | 26 | {mathematics,simulations,engineering} |
- python-escript | 26 | {simulations,numericalcomputation,engineering} |
- persalys | 25 | {mathematics,engineering,statistics} |
+ getdp | 26 | {simulations,mathematics,engineering} |
+ python-escript | 26 | {numericalcomputation,simulations,engineering} |
+ persalys | 25 | {statistics,mathematics,engineering} |
psurface | 25 | {numericalcomputation} |
adolc | 24 | {numericalcomputation} |
- debian-science | 24 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 24 | {machine-learning,economics,physics,nanoscale-physics} |
eccodes | 24 | {meteorology,meteorology-dev} |
- fftw | 24 | {mathematics-dev,meteorology-dev,physics-dev} |
+ fftw | 24 | {meteorology-dev,mathematics-dev,physics-dev} |
grads | 24 | {meteorology} |
libmatio | 24 | {mathematics-dev} |
picosat | 24 | {logic} |
libcvd | 23 | {imageanalysis} |
- toulbar2 | 23 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 23 | {logic,physics,mathematics,numericalcomputation} |
xygrib | 23 | {meteorology} |
dune-uggrid | 22 | {mathematics-dev} |
flintqs | 22 | {mathematics} |
debian-science | 21 | {tools} |
eccodes | 21 | {meteorology-dev} |
debian-science | 20 | {electrophysiology} |
- debian-science | 20 | {machine-learning,neuroscience-cognitive} |
- flann | 20 | {mathematics-dev,engineering-dev} |
+ debian-science | 20 | {neuroscience-cognitive,machine-learning} |
+ flann | 20 | {engineering-dev,mathematics-dev} |
libm4ri | 20 | {mathematics-dev} |
mseed2sac | 18 | {dataacquisition-dev} |
gts | 17 | {viewing-dev} |
ipe-tools | 17 | {typesetting} |
- jeuclid | 17 | {viewing,typesetting} |
+ jeuclid | 17 | {typesetting,viewing} |
sat4j | 17 | {logic} |
bossa | 16 | {devices} |
alberta | 15 | {engineering-dev} |
cliquer | 15 | {mathematics-dev} |
feff85exafs | 15 | {chemistry} |
- libvigraimpex | 15 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 15 | {machine-learning,imageanalysis-dev} |
opencascade | 14 | {simulations} |
rubiks | 14 | {mathematics,geometry} |
- libitpp | 13 | {engineering-dev,mathematics-dev} |
+ libitpp | 13 | {mathematics-dev,engineering-dev} |
python-cdo | 13 | {meteorology} |
toontag | 13 | {numericalcomputation} |
ncl | 12 | {meteorology} |
@@ -79,8 +79,8 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
auto-07p | 10 | {mathematics} |
chemical-structures | 10 | {chemistry} |
cliquer | 10 | {mathematics} |
- debian-science | 10 | {statistics,economics,nanoscale-physics,physics} |
- fftw | 10 | {meteorology-dev,physics-dev,mathematics-dev} |
+ debian-science | 10 | {economics,physics,statistics,nanoscale-physics} |
+ fftw | 10 | {meteorology-dev,mathematics-dev,physics-dev} |
form | 10 | {mathematics} |
hdf-eos5 | 10 | {meteorology-dev} |
libccp4 | 10 | {nanoscale-physics-dev} |
@@ -94,7 +94,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
cdftools | 9 | {meteorology} |
iml | 9 | {mathematics-dev} |
lrcalc | 9 | {mathematics-dev} |
- matlab-support | 9 | {mathematics,numericalcomputation} |
+ matlab-support | 9 | {numericalcomputation,mathematics} |
qwtplot3d | 9 | {viewing-dev} |
rw | 9 | {mathematics-dev} |
uctodata | 9 | {linguistics} |
@@ -103,7 +103,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
coda | 8 | {meteorology} |
hdf-eos4 | 8 | {meteorology-dev} |
libgctp | 8 | {meteorology-dev} |
- liblxi | 8 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 8 | {engineering-dev,dataacquisition-dev} |
liborigin2 | 8 | {viewing-dev} |
magics++ | 8 | {meteorology-dev} |
ncl | 8 | {meteorology-dev} |
@@ -113,7 +113,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
cylc-flow | 7 | {meteorology} |
fpzip | 7 | {meteorology} |
hfst | 7 | {linguistics} |
- libgtkdatabox | 7 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 7 | {viewing-dev,engineering-dev} |
libm4rie | 7 | {mathematics-dev} |
libxsmm | 7 | {mathematics-dev} |
metview | 7 | {meteorology} |
@@ -147,17 +147,17 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
cld2 | 4 | {linguistics} |
coinor-bonmin | 4 | {mathematics} |
dimbl | 4 | {linguistics} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
+ hpcc | 4 | {numericalcomputation,distributedcomputing} |
libmatheval | 4 | {mathematics-dev} |
libzn-poly | 4 | {mathematics-dev} |
mpi4py-fft | 4 | {mathematics-dev} |
openstereogram | 4 | {tools} |
- spfft | 4 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 4 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
ssm | 4 | {nanoscale-physics-dev} |
ucto | 4 | {linguistics} |
urdfdom-headers | 4 | {robotics-dev} |
apache-opennlp | 3 | {linguistics} |
- code-saturne | 3 | {engineering-dev,mathematics-dev} |
+ code-saturne | 3 | {mathematics-dev,engineering-dev} |
dune-functions | 3 | {mathematics-dev} |
dune-localfunctions | 3 | {mathematics-dev} |
dune-typetree | 3 | {mathematics-dev} |
@@ -168,7 +168,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
ratpoints | 3 | {mathematics-dev} |
ros-opencv-apps | 3 | {robotics} |
veccore | 3 | {mathematics-dev} |
- coinmp | 2 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 2 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {nanoscale-physics-dev} |
dxflib | 2 | {engineering-dev} |
@@ -189,7 +189,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
silo-llnl | 2 | {engineering-dev} |
timbl | 2 | {linguistics} |
timblserver | 2 | {linguistics} |
- trilinos | 2 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 2 | {physics-dev,engineering-dev,mathematics-dev} |
apertium-streamparser | 1 | {linguistics} |
apophenia | 1 | {statistics} |
apriltag | 1 | {robotics-dev} |
@@ -199,12 +199,12 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
cvector | 1 | {mathematics-dev} |
fpzip | 1 | {meteorology-dev} |
frogdata | 1 | {linguistics} |
- hepmc3 | 1 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 1 | {nanoscale-physics-dev,highenergy-physics-dev} |
ipe-tools | 1 | {typesetting} |
libdogleg | 1 | {mathematics-dev} |
meshsdfilter | 1 | {mathematics-dev} |
neartree | 1 | {numericalcomputation,mathematics-dev} |
- python-escript | 1 | {numericalcomputation,engineering,simulations} |
+ python-escript | 1 | {simulations,engineering,numericalcomputation} |
quadrule | 1 | {mathematics-dev} |
schroedinger-coordgenlibs | 1 | {nanoscale-physics-dev,chemistry} |
ssm | 1 | {nanoscale-physics} |
@@ -230,7 +230,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
apertium-urd-hin | 0 | {linguistics} |
asl | 0 | {physics-dev} |
atlas-ecmwf | 0 | {meteorology-dev} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -250,7 +250,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
looptools | 0 | {highenergy-physics-dev} |
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
openctm | 0 | {physics-dev} |
@@ -266,7 +266,7 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
tachyon | 0 | {mathematics} |
@@ -282,6 +282,6 @@ Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
xppaut | 0 | {neuroscience-modeling} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
(312 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Apr 2026 13:42:05 +0000
+Last-Update: Sun, 05 Apr 2026 01:42:06 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/afe5c97773fe9f64e8497031413aa631cf02fa77
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/afe5c97773fe9f64e8497031413aa631cf02fa77
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