[med-svn] [Git][med-team/chromimpute][master] 7 commits: Fix the autopkgtest with Java 25. Closes: #1130150.

[Santiago Vila (@sanvila)]

Santiago Vila pushed to branch master at Debian Med / chromimpute


Commits:
5fa0ad95 by Adrian Bunk at 2026-04-08T21:24:00+02:00
Fix the autopkgtest with Java 25. Closes: #1130150.

- - - - -
6488149e by Santiago Vila at 2026-04-08T21:25:00+02:00
d/control: Drop "Rules-Requires-Root: no" (default).

- - - - -
c69bd6e4 by Santiago Vila at 2026-04-08T21:26:00+02:00
d/control: Drop "Priority: optional" (default).

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faba145d by Santiago Vila at 2026-04-08T21:27:00+02:00
d/control: Update standards-version.

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3821d1dc by Santiago Vila at 2026-04-08T21:28:00+02:00
d/salsa-ci.yml: Use the simplified version.

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51a71d2a by Santiago Vila at 2026-04-08T21:29:00+02:00
d/salsa-ci.yml: Disable redundant/duplicate jobs.

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848e20fb by Santiago Vila at 2026-04-08T21:30:00+02:00
Upload for unstable as 1.0.3+dfsg-6

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/salsa-ci.yml
- debian/tests/print-version


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,18 @@
+chromimpute (1.0.3+dfsg-6) unstable; urgency=medium
+
+  * Team upload.
+
+  [ Adrian Bunk ]
+  * Fix the autopkgtest with Java 25. Closes: #1130150.
+
+  [ Santiago Vila ]
+  * Drop "Rules-Requires-Root: no" (default).
+  * Drop "Priority: optional" (default).
+  * Update standards-version.
+  * Simplify and fine-tune salsa-ci.yml.
+
+ -- Santiago Vila <sanvila at debian.org>  Wed, 08 Apr 2026 21:30:00 +0200
+
 chromimpute (1.0.3+dfsg-5) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -2,15 +2,13 @@ Source: chromimpute
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Dylan Aïssi <daissi at debian.org>
 Section: science
-Priority: optional
 Build-Depends: debhelper-compat (= 13),
                javahelper
 Build-Depends-Indep: default-jdk
-Standards-Version: 4.6.2
+Standards-Version: 4.7.4
 Vcs-Browser: https://salsa.debian.org/med-team/chromimpute
 Vcs-Git: https://salsa.debian.org/med-team/chromimpute.git
 Homepage: https://www.biolchem.ucla.edu/labs/ernst/ChromImpute/
-Rules-Requires-Root: no
 
 Package: chromimpute
 Architecture: all


=====================================
debian/salsa-ci.yml
=====================================
@@ -1,4 +1,7 @@
 ---
 include:
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml
+
+variables:
+  SALSA_CI_DISABLE_BUILD_PACKAGE_ALL: 1
+  SALSA_CI_DISABLE_BUILD_PACKAGE_ANY: 1


=====================================
debian/tests/print-version
=====================================
@@ -2,11 +2,11 @@
 # http://dep.debian.net/deps/dep8/
 # Autopkgtest: Test if ChromImpute run correctly
 # Author: Dylan Aïssi <bob.dybian at gmail.com>
-# Last-Update: 2018-04-19
+# Last-Update: 2026-04-08
 
 # ChromImpute needs large files to work. Developers provided examples files ~1GB.
 # We cannot include these large files in a package, so we cannot write a proper test for autopkgtest. 
 # Despite this, we can try to print the ChromImpute version.
 
 # Just print the version
-java -mx4000M -jar /usr/share/java/chromimpute.jar Version
+java -jar /usr/share/java/chromimpute.jar Version



View it on GitLab: https://salsa.debian.org/med-team/chromimpute/-/compare/658403f7bbfa72c86086f8d46f1d0608f6fea95d...848e20fb545759c86d8371cd9864c27f1e49b7c9

-- 
View it on GitLab: https://salsa.debian.org/med-team/chromimpute/-/compare/658403f7bbfa72c86086f8d46f1d0608f6fea95d...848e20fb545759c86d8371cd9864c27f1e49b7c9
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