[med-svn] [Git][med-team/ea-utils][master] 8 commits: Fix watchfile to detect new versions on github (routine-update)
Charles Plessy (@plessy)
gitlab at salsa.debian.org
Thu Apr 16 00:34:40 BST 2026
Charles Plessy pushed to branch master at Debian Med / ea-utils
Commits:
7d08d79c by Charles Plessy at 2026-04-16T08:30:58+09:00
Fix watchfile to detect new versions on github (routine-update)
- - - - -
3d7e646a by Charles Plessy at 2026-04-16T08:30:59+09:00
Standards-Version: 4.7.4 (routine-update)
- - - - -
7c354983 by Charles Plessy at 2026-04-16T08:31:13+09:00
Changes made by cme
- - - - -
8217dba9 by Charles Plessy at 2026-04-16T08:31:16+09:00
Restrict to 64-bits architectures (routine-update)
- - - - -
40d2f092 by Charles Plessy at 2026-04-16T08:31:19+09:00
Restrict to little-endian architectures (routine-update)
- - - - -
cc3d23d9 by Charles Plessy at 2026-04-16T08:31:27+09:00
Add ITP bugs in 1.1.2-0biolinux2.
Changes-By: lintian-brush
- - - - -
15a86d13 by Charles Plessy at 2026-04-16T08:31:41+09:00
Set upstream metadata fields: Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
- - - - -
8ce4f23b by Charles Plessy at 2026-04-16T08:33:03+09:00
routine-update: Ready to upload to unstable
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/upstream/metadata
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,9 +1,21 @@
-ea-utils (1.1.2+dfsg-10) UNRELEASED; urgency=medium
+ea-utils (1.1.2+dfsg-10) unstable; urgency=medium
+ * Team upload.
+ [ Andreas Tille ]
* Remove Tim Booth <tbooth at ceh.ac.uk> since address is bouncing
(Thank you for your work on this package, Tim)
- -- Andreas Tille <tille at debian.org> Mon, 16 Sep 2024 10:01:33 +0200
+ [ Charles Plessy ]
+ * Fix watchfile to detect new versions on github (routine-update)
+ * Standards-Version: 4.7.4 (routine-update)
+ * Reflow Uploaders field (cme)
+ * Remove Priority field (cme)
+ * Restrict to 64-bits architectures (routine-update)
+ * Restrict to little-endian architectures (routine-update)
+ * Add ITP bugs in 1.1.2-0biolinux2.
+ * Set upstream metadata fields: Repository, Repository-Browse.
+
+ -- Charles Plessy <plessy at debian.org> Thu, 16 Apr 2026 08:31:43 +0900
ea-utils (1.1.2+dfsg-9) unstable; urgency=medium
@@ -113,7 +125,7 @@ ea-utils (1.1.2-0biolinux4) trusty; urgency=medium
ea-utils (1.1.2-0biolinux2) trusty; urgency=low
- * Initial release for Bio-Linux 8
+ * Initial release for Bio-Linux 8. Closes: #793585
* Build against samtools from Debian.
* Leave utility copy of sparsehash in for now, as Trusty
has v1 of the lib and we want v2.
=====================================
debian/control
=====================================
@@ -1,14 +1,17 @@
Source: ea-utils
+Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>
+Uploaders:
+ Andreas Tille <tille at debian.org>,
Section: science
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
- libbam-dev,
- zlib1g-dev,
- libgsl-dev,
- libsparsehash-dev,
-Standards-Version: 4.6.0
+Build-Depends:
+ debhelper-compat (= 13),
+ libbam-dev,
+ zlib1g-dev,
+ libgsl-dev,
+ libsparsehash-dev,
+ architecture-is-64-bit,
+ architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/med-team/ea-utils
Vcs-Git: https://salsa.debian.org/med-team/ea-utils.git
Homepage: https://expressionanalysis.github.io/ea-utils/
@@ -16,16 +19,18 @@ Rules-Requires-Root: no
Package: ea-utils
Architecture: any
-Depends: ${shlibs:Depends},
- ${misc:Depends},
- r-base-core,
- r-cran-getopt,
- r-cran-hmisc,
- r-cran-lattice,
- r-cran-survival,
- r-cran-formula,
- r-cran-ggplot2
-Recommends: med-config (>= 2.1)
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
+ r-base-core,
+ r-cran-getopt,
+ r-cran-hmisc,
+ r-cran-lattice,
+ r-cran-survival,
+ r-cran-formula,
+ r-cran-ggplot2,
+Recommends:
+ med-config,
Description: command-line tools for processing biological sequencing data
Ea-utils provides a set of command-line tools for processing biological
sequencing data, barcode demultiplexing, adapter trimming, etc.
=====================================
debian/upstream/metadata
=====================================
@@ -23,3 +23,5 @@ Registry:
Entry: SCR_005553
- Name: conda:bioconda
Entry: NA
+Repository: https://github.com/ExpressionAnalysis/ea-utils.git
+Repository-Browse: https://github.com/ExpressionAnalysis/ea-utils
=====================================
debian/watch
=====================================
@@ -4,4 +4,4 @@ opts=dversionmangle=s/.*/0.No-Track/ \
https://people.debian.org/~eriberto/ FakeWatchNoUpstreamTrackingForThisPackage-(\d\S+)\.gz
#opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
-# https://github.com/ExpressionAnalysis/ea-utils/releases .*/archive/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+# https://github.com/ExpressionAnalysis/ea-utils/releases .*/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
View it on GitLab: https://salsa.debian.org/med-team/ea-utils/-/compare/11b10785c9fbc5cabd34bdfa6fd041f951b385b3...8ce4f23b38d619f7196ea1821db505b776cdf872
--
View it on GitLab: https://salsa.debian.org/med-team/ea-utils/-/compare/11b10785c9fbc5cabd34bdfa6fd041f951b385b3...8ce4f23b38d619f7196ea1821db505b776cdf872
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