[med-svn] [Git][med-team/cgview][master] 10 commits: Adding explicit dependency on java-wrappers for the binary package
Pierre Gruet (@pgt)
gitlab at salsa.debian.org
Sat Apr 18 19:35:15 BST 2026
Pierre Gruet pushed to branch master at Debian Med / cgview
Commits:
4f292d02 by Pierre Gruet at 2026-04-18T19:48:40+02:00
Adding explicit dependency on java-wrappers for the binary package
- - - - -
28bc9565 by Pierre Gruet at 2026-04-18T19:48:59+02:00
Removing Priority: optional, which is default
- - - - -
a007fb4a by Pierre Gruet at 2026-04-18T19:49:04+02:00
Removing R-R-R: no, which is now default
- - - - -
dd537066 by Pierre Gruet at 2026-04-18T19:49:19+02:00
Raising Standards version to 4.7.4
- - - - -
b2e1c9a2 by Pierre Gruet at 2026-04-18T19:50:18+02:00
Rewriting d/watch with version 5
- - - - -
dfab824d by Pierre Gruet at 2026-04-18T19:51:39+02:00
Updating changelog
- - - - -
b2a4839d by Pierre Gruet at 2026-04-18T20:00:58+02:00
Fixing Last-Update fields of patches
- - - - -
802857dc by Pierre Gruet at 2026-04-18T20:01:30+02:00
Removing now unused Lintian override about file with long lines
- - - - -
acbee900 by Pierre Gruet at 2026-04-18T20:01:48+02:00
Updating changelog
- - - - -
b55c0688 by Pierre Gruet at 2026-04-18T20:01:55+02:00
Upload to unstable
- - - - -
7 changed files:
- debian/changelog
- debian/control
- debian/patches/fix_batic-svggen_SVGGraphics2D_call.patch
- debian/patches/manifesto_pointing_to_debian_jars.patch
- debian/patches/polish_usage_message.patch
- − debian/source/lintian-overrides
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,16 @@
+cgview (0.0.20100111-8) unstable; urgency=medium
+
+ * Team upload
+ * Adding explicit dependency on java-wrappers for the binary package
+ * Raising Standards version to 4.7.4:
+ - Removing Priority: optional, which is default
+ - Removing R-R-R: no, which is now default
+ * Rewriting d/watch with version 5
+ * Fixing Last-Update fields of patches
+ * Removing now unused Lintian override about file with long lines
+
+ -- Pierre Gruet <pgt at debian.org> Sat, 18 Apr 2026 20:01:50 +0200
+
cgview (0.0.20100111-7) unstable; urgency=medium
* Team upload
=====================================
debian/control
=====================================
@@ -2,7 +2,6 @@ Source: cgview
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Andreas Tille <tille at debian.org>
Section: science
-Priority: optional
Build-Depends: debhelper-compat (= 12),
javahelper,
default-jdk,
@@ -10,17 +9,17 @@ Build-Depends: debhelper-compat (= 12),
libcommons-lang-java,
libjargs-java,
libxerces2-java
-Standards-Version: 4.5.0
+Standards-Version: 4.7.4
Vcs-Browser: https://salsa.debian.org/med-team/cgview
Vcs-Git: https://salsa.debian.org/med-team/cgview.git
Homepage: http://wishart.biology.ualberta.ca/cgview/
-Rules-Requires-Root: no
Package: cgview
Architecture: all
Depends: ${java:Depends},
${misc:Depends},
- default-jre
+ default-jre,
+ java-wrappers
Description: Circular Genome Viewer
CGView is a Java package for generating high quality, zoomable maps of
circular genomes. Its primary purpose is to serve as a component of
=====================================
debian/patches/fix_batic-svggen_SVGGraphics2D_call.patch
=====================================
@@ -1,5 +1,5 @@
Author: Andreas Tille <tille at debian.org>
-Last-Update: Fri, 27 Nov 2015 09:31:44 +0100
+Last-Update: 2015-11-27
Description: Fix wrong interface usage
According to https://xmlgraphics.apache.org/batik/javadoc/org/apache/batik/svggen/SVGGraphics2D.html
stream can be called with different arguments. The closest call to the one
=====================================
debian/patches/manifesto_pointing_to_debian_jars.patch
=====================================
@@ -1,5 +1,5 @@
Author: Andreas Tille <tille at debian.org>
-Last-Update: Fri, 27 Nov 2015 09:31:44 +0100
+Last-Update: 2015-11-27
Description: Use locations of JARs inside Debian in manifesto
--- a/manifestinfo
=====================================
debian/patches/polish_usage_message.patch
=====================================
@@ -1,5 +1,5 @@
Author: Andreas Tille <tille at debian.org>
-Last-Update: Fri, 27 Nov 2015 09:31:44 +0100
+Last-Update: 2015-11-27
Description: Adapt usage hints to the fact that there is /usr/bin/cgview
--- a/src/ca/ualberta/stothard/cgview/CgviewIO.java
=====================================
debian/source/lintian-overrides deleted
=====================================
@@ -1,2 +0,0 @@
-# This files is actually editable JS source and the lintian error is a false positive
-cgview source: source-is-missing src/ca/ualberta/stothard/cgview/includes/overlib.js line length is 562 characters (>512)
=====================================
debian/watch
=====================================
@@ -1,6 +1,8 @@
-version=4
-opts=dversionmangle=s/.*/0.No-Release/ \
- https://people.debian.org/~eriberto/ FakeWatchNoUpstreamReleaseForThisPackage-(\d\S+)\.gz
+Version: 5
+
+Source: https://people.debian.org/~eriberto/
+Matching-Pattern: FakeWatchNoUpstreamReleaseForThisPackage-(\d\S+)\.gz
+Dversionmangle: s/.*/0.No-Release/
# manually downloaded unversioned file from
# http://wishart.biology.ualberta.ca/cgview/download.html
View it on GitLab: https://salsa.debian.org/med-team/cgview/-/compare/ed838886cb25a6e10bd3732aa587f47e5cfcf6ba...b55c0688c2e5e07f4bdd559b21865216ad6a6f06
--
View it on GitLab: https://salsa.debian.org/med-team/cgview/-/compare/ed838886cb25a6e10bd3732aa587f47e5cfcf6ba...b55c0688c2e5e07f4bdd559b21865216ad6a6f06
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