Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ffbd61e0 by Andreas Tille at 2026-08-02T01:42:23+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
+Last-Update: Sun, 02 Aug 2026 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -9,7 +9,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
pixelmed | 13 | {imaging} |
adun.app | 12 | {bio} |
gnumed-server | 12 | {covid-19,practice} |
- oscar | 12 | {tools,practice,data} |
+ oscar | 12 | {data,practice,tools} |
orthanc-gdcm | 11 | {imaging} |
biojava-live | 10 | {bio-dev} |
icb-utils | 9 | {bio-dev} |
@@ -18,21 +18,21 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
beast-mcmc | 8 | {bio,bio-phylogeny} |
orthanc-postgresql | 7 | {imaging} |
orthanc-mysql | 6 | {imaging} |
- plasmidid | 6 | {bio,covid-19} |
+ plasmidid | 6 | {covid-19,bio} |
rambo-k | 6 | {bio} |
saint | 6 | {bio} |
sight | 6 | {imaging} |
tracetuner | 6 | {bio} |
biojava6-live | 5 | {bio-dev} |
- bio-tradis | 5 | {bio,bio-dev} |
- dextractor | 5 | {bio,covid-19} |
+ bio-tradis | 5 | {bio-dev,bio} |
+ dextractor | 5 | {covid-19,bio} |
embassy-domainatrix | 5 | {cloud,bio} |
htscodecs | 5 | {covid-19,bio-dev} |
piler | 5 | {bio} |
sprai | 5 | {bio} |
surpyvor | 5 | {bio} |
embassy-domalign | 4 | {cloud,bio} |
- embassy-domsearch | 4 | {cloud,bio} |
+ embassy-domsearch | 4 | {bio,cloud} |
fastml | 4 | {bio} |
ipig | 4 | {bio} |
kmerresistance | 4 | {bio} |
@@ -40,16 +40,16 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
libjloda-java | 4 | {bio-dev} |
malt | 4 | {bio} |
megan-ce | 4 | {bio} |
- melting | 4 | {bio,cloud} |
+ melting | 4 | {cloud,bio} |
mhap | 4 | {bio-ngs,bio} |
- phyutility | 4 | {cloud,bio} |
- proalign | 4 | {bio,bio-phylogeny} |
+ phyutility | 4 | {bio,cloud} |
+ proalign | 4 | {bio-phylogeny,bio} |
sga | 4 | {bio} |
spread-phy | 4 | {bio,bio-phylogeny} |
surankco | 4 | {bio} |
- thesias | 4 | {covid-19,bio} |
- tophat-recondition | 4 | {bio,covid-19} |
- treeview | 4 | {bio-phylogeny,bio} |
+ thesias | 4 | {bio,covid-19} |
+ tophat-recondition | 4 | {covid-19,bio} |
+ treeview | 4 | {bio,bio-phylogeny} |
brig | 3 | {bio} |
ctffind | 3 | {bio} |
lamarc | 3 | {bio} |
@@ -106,17 +106,17 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
capsule-maven-nextflow | 0 | {bio-dev} |
cmtk | 0 | {imaging} |
ctn | 0 | {imaging-dev} |
- cufflinks | 0 | {bio,cloud} |
+ cufflinks | 0 | {cloud,bio} |
eegdev | 0 | {imaging-dev} |
elastix | 0 | {imaging} |
emboss-explorer | 0 | {bio} |
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbioparser-dev | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
@@ -125,11 +125,11 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
orthanc-imagej | 0 | {imaging} |
pbseqlib | 0 | {bio-dev} |
python-seqcluster | 0 | {bio} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
rdp-classifier | 0 | {bio} |
resfinder-db | 0 | {bio} |
savvy | 0 | {bio-dev} |
@@ -138,11 +138,11 @@ Last-Update: Sat, 01 Aug 2026 13:42:03 +0000
sight | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
- varscan | 0 | {covid-19,bio} |
- vienna-rna | 0 | {bio,covid-19} |
+ varscan | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(167 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
+Last-Update: Sun, 02 Aug 2026 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------
@@ -13,50 +13,50 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
refmac-dictionary | 88 | {highenergy-physics-dev,chemistry} |
mbpoll | 65 | {simulations} |
giac | 47 | {mathematics} |
- guiqwt | 41 | {numericalcomputation,viewing} |
+ guiqwt | 41 | {viewing,numericalcomputation} |
muparser | 37 | {mathematics-dev} |
setzer | 36 | {typesetting} |
imview | 35 | {viewing} |
sardana | 31 | {dataacquisition} |
teem | 31 | {imageanalysis} |
- flann | 26 | {mathematics-dev,engineering-dev} |
+ flann | 26 | {engineering-dev,mathematics-dev} |
libmatio | 24 | {mathematics-dev} |
palp | 24 | {mathematics} |
- persalys | 24 | {statistics,mathematics,engineering} |
+ persalys | 24 | {engineering,statistics,mathematics} |
arduino-mk | 23 | {robotics} |
pyzo | 22 | {numericalcomputation} |
apophenia | 21 | {statistics} |
- coinor-symphony | 21 | {logic,mathematics,numericalcomputation} |
- lxi-tools | 21 | {dataacquisition,engineering} |
+ coinor-symphony | 21 | {numericalcomputation,logic,mathematics} |
+ lxi-tools | 21 | {engineering,dataacquisition} |
colpack | 20 | {numericalcomputation} |
grads | 20 | {meteorology} |
adolc | 19 | {numericalcomputation} |
sketch | 19 | {typesetting} |
eccodes | 18 | {meteorology,meteorology-dev} |
feedgnuplot | 17 | {viewing} |
- fftw | 17 | {mathematics-dev,meteorology-dev,physics-dev} |
+ fftw | 17 | {meteorology-dev,mathematics-dev,physics-dev} |
ntl | 16 | {mathematics-dev} |
- persalys | 15 | {mathematics,engineering,statistics} |
+ persalys | 15 | {statistics,mathematics,engineering} |
ppl | 15 | {numericalcomputation} |
- debian-science | 14 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
+ debian-science | 14 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
dune-uggrid | 14 | {mathematics-dev} |
eccodes | 14 | {meteorology-dev} |
psurface | 14 | {numericalcomputation} |
sat4j | 14 | {logic} |
xygrib | 13 | {meteorology} |
- libvigraimpex | 12 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 12 | {machine-learning,imageanalysis-dev} |
lttoolbox | 12 | {linguistics} |
pcl | 12 | {robotics-dev} |
picosat | 12 | {logic} |
- python-escript | 12 | {simulations,numericalcomputation,engineering} |
+ python-escript | 12 | {numericalcomputation,simulations,engineering} |
ros-vcstool | 12 | {robotics-dev} |
- toulbar2 | 12 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 12 | {logic,physics,mathematics,numericalcomputation} |
apertium | 11 | {linguistics} |
- getdp | 11 | {mathematics,simulations,engineering} |
+ getdp | 11 | {simulations,mathematics,engineering} |
ipe-tools | 11 | {typesetting} |
libcvd | 11 | {imageanalysis} |
vdt | 11 | {mathematics-dev} |
- debian-science | 10 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 10 | {machine-learning,economics,physics,nanoscale-physics} |
flintqs | 10 | {mathematics} |
libccp4 | 10 | {nanoscale-physics-dev} |
alberta | 9 | {engineering-dev} |
@@ -71,15 +71,15 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
python-cdo | 8 | {meteorology} |
auto-07p | 7 | {mathematics} |
debian-science | 7 | {tools} |
- fftw | 7 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 7 | {meteorology-dev,mathematics-dev,physics-dev} |
iml | 7 | {mathematics-dev} |
- jeuclid | 7 | {viewing,typesetting} |
+ jeuclid | 7 | {typesetting,viewing} |
libhomfly | 7 | {mathematics-dev} |
metar | 7 | {meteorology} |
mseed2sac | 7 | {dataacquisition-dev} |
sagemath-database-conway-polynomials | 7 | {mathematics} |
cliquer | 6 | {mathematics-dev} |
- debian-science | 6 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 6 | {neuroscience-cognitive,machine-learning} |
form | 6 | {mathematics} |
gf2x | 6 | {mathematics-dev} |
hfst | 6 | {linguistics} |
@@ -89,14 +89,14 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
rheolef | 6 | {mathematics} |
rw | 6 | {mathematics-dev} |
cliquer | 5 | {mathematics} |
- coinmp | 5 | {numericalcomputation,mathematics-dev,logic} |
- debian-science | 5 | {statistics,economics,nanoscale-physics,physics} |
+ coinmp | 5 | {numericalcomputation,logic,mathematics-dev} |
+ debian-science | 5 | {economics,physics,statistics,nanoscale-physics} |
libm4rie | 5 | {mathematics-dev} |
libmatheval | 5 | {mathematics} |
mpi4py-fft | 5 | {mathematics-dev} |
ncl | 5 | {meteorology-dev} |
polylib | 5 | {mathematics} |
- spfft | 5 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 5 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
urdfdom-headers | 5 | {robotics-dev} |
apertium-apy | 4 | {linguistics} |
clipper | 4 | {nanoscale-physics-dev} |
@@ -104,12 +104,12 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
dxsamples | 4 | {nanoscale-physics} |
hdf-eos4 | 4 | {meteorology-dev} |
hdf-eos5 | 4 | {meteorology-dev} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
- libitpp | 4 | {engineering-dev,mathematics-dev} |
+ hpcc | 4 | {numericalcomputation,distributedcomputing} |
+ libitpp | 4 | {mathematics-dev,engineering-dev} |
libmatheval | 4 | {mathematics-dev} |
libxsmm | 4 | {mathematics-dev} |
lrcalc | 4 | {mathematics} |
- matlab-support | 4 | {mathematics,numericalcomputation} |
+ matlab-support | 4 | {numericalcomputation,mathematics} |
mmdb | 4 | {nanoscale-physics-dev,highenergy-physics-dev} |
newmat | 4 | {mathematics-dev} |
python-aws-xray-sdk | 4 | {dataacquisition-dev} |
@@ -124,7 +124,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
iapws | 3 | {meteorology} |
libgctp | 3 | {meteorology-dev} |
liblbfgs | 3 | {mathematics-dev} |
- liblxi | 3 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 3 | {engineering-dev,dataacquisition-dev} |
libzn-poly | 3 | {mathematics-dev} |
magics++ | 3 | {meteorology-dev} |
odc | 3 | {meteorology} |
@@ -165,7 +165,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
quadrule | 2 | {mathematics-dev} |
silo-llnl | 2 | {engineering} |
spaghetti | 2 | {geography} |
- trilinos | 2 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 2 | {physics-dev,engineering-dev,mathematics-dev} |
uctodata | 2 | {linguistics} |
x13as | 2 | {economics} |
apertium-streamparser | 1 | {linguistics} |
@@ -187,7 +187,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
ipe-tools | 1 | {typesetting} |
irstlm | 1 | {linguistics} |
libcgns | 1 | {engineering-dev} |
- libgtkdatabox | 1 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 1 | {viewing-dev,engineering-dev} |
liborigin2 | 1 | {viewing-dev} |
makedepf90 | 1 | {meteorology-dev} |
nrn-iv | 1 | {biology} |
@@ -217,7 +217,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
apertium-swe-dan | 0 | {linguistics} |
apertium-urd | 0 | {linguistics} |
apertium-urd-hin | 0 | {linguistics} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -231,7 +231,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
fastjet | 0 | {highenergy-physics-dev} |
frogdata | 0 | {linguistics} |
glpk-java | 0 | {mathematics-dev} |
- hepmc3 | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
libfolia | 0 | {linguistics} |
libquantum | 0 | {numericalcomputation} |
libsdsl | 0 | {dataacquisition-dev} |
@@ -240,14 +240,14 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
mbtserver | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
nrn-mod2c | 0 | {biology} |
openctm | 0 | {physics-dev} |
opengv | 0 | {geometry} |
openigtlink | 0 | {robotics-dev} |
- python-escript | 0 | {numericalcomputation,engineering,simulations} |
+ python-escript | 0 | {simulations,engineering,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
ros-collada-urdf | 0 | {robotics} |
@@ -260,7 +260,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
ssm | 0 | {nanoscale-physics} |
@@ -276,7 +276,7 @@ Last-Update: Sat, 01 Aug 2026 13:42:05 +0000
xppaut | 0 | {neuroscience-modeling} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
tamuanova | -1 | {statistics} |
ucto | -1 | {linguistics} |
(307 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 01 Aug 2026 13:42:06 +0000
+Last-Update: Sun, 02 Aug 2026 01:42:04 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ffbd61e0e2594b6012b4f3cd1271e027e8e10e47
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ffbd61e0e2594b6012b4f3cd1271e027e8e10e47
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