Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
9d5c911a by Andreas Tille at 2026-08-09T01:42:34+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
+Last-Update: Sun, 09 Aug 2026 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -6,7 +6,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
mrtrix3 | 16 | {imaging} |
sight | 16 | {imaging} |
gnumed-server | 15 | {covid-19,practice} |
- oscar | 13 | {tools,practice,data} |
+ oscar | 13 | {data,practice,tools} |
adun.app | 12 | {bio} |
orthanc-gdcm | 11 | {imaging} |
pixelmed | 11 | {imaging} |
@@ -19,8 +19,8 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
icb-utils | 6 | {bio-dev} |
orthanc-mysql | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
- plasmidid | 6 | {bio,covid-19} |
- bio-tradis | 5 | {bio,bio-dev} |
+ plasmidid | 6 | {covid-19,bio} |
+ bio-tradis | 5 | {bio-dev,bio} |
embassy-domainatrix | 5 | {cloud,bio} |
htscodecs | 5 | {covid-19,bio-dev} |
libdivsufsort | 5 | {bio-dev} |
@@ -31,15 +31,15 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
tracetuner | 5 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
biojava6-live | 4 | {bio-dev} |
- dextractor | 4 | {bio,covid-19} |
+ dextractor | 4 | {covid-19,bio} |
embassy-domalign | 4 | {cloud,bio} |
fastml | 4 | {bio} |
ipig | 4 | {bio} |
- phyutility | 4 | {cloud,bio} |
+ phyutility | 4 | {bio,cloud} |
runcircos-gui | 4 | {bio} |
sga | 4 | {bio} |
- tophat-recondition | 4 | {bio,covid-19} |
- embassy-domsearch | 3 | {cloud,bio} |
+ tophat-recondition | 4 | {covid-19,bio} |
+ embassy-domsearch | 3 | {bio,cloud} |
insighttoolkit5 | 3 | {imaging-dev} |
kmerresistance | 3 | {bio} |
lamarc | 3 | {bio} |
@@ -61,12 +61,12 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
libgenome | 2 | {bio-dev} |
libseqlib | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
- proalign | 2 | {bio,bio-phylogeny} |
+ proalign | 2 | {bio-phylogeny,bio} |
python-cgelib | 2 | {bio-dev} |
spread-phy | 2 | {bio,bio-phylogeny} |
- thesias | 2 | {covid-19,bio} |
+ thesias | 2 | {bio,covid-19} |
trace2dbest | 2 | {bio} |
- treeview | 2 | {bio-phylogeny,bio} |
+ treeview | 2 | {bio,bio-phylogeny} |
bambamc | 1 | {bio-dev} |
brig | 1 | {bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
@@ -89,7 +89,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
libvbz-hdf-plugin | 1 | {bio-dev} |
malt | 1 | {bio} |
megan-ce | 1 | {bio} |
- melting | 1 | {bio,cloud} |
+ melting | 1 | {cloud,bio} |
mhap | 1 | {bio-ngs,bio} |
ncbi-vdb | 1 | {bio-dev} |
pbcopper | 1 | {bio-dev} |
@@ -104,17 +104,17 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
capsule-maven-nextflow | 0 | {bio-dev} |
cmtk | 0 | {imaging} |
ctn | 0 | {imaging-dev} |
- cufflinks | 0 | {bio,cloud} |
+ cufflinks | 0 | {cloud,bio} |
eegdev | 0 | {imaging-dev} |
elastix | 0 | {imaging} |
emboss-explorer | 0 | {bio} |
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbioparser-dev | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
@@ -124,12 +124,12 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
maxflow | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
pbseqlib | 0 | {bio-dev} |
python-seqcluster | 0 | {bio} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
rdp-classifier | 0 | {bio} |
resfinder-db | 0 | {bio} |
savvy | 0 | {bio-dev} |
@@ -138,11 +138,11 @@ Last-Update: Sat, 08 Aug 2026 13:42:03 +0000
sight | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
- varscan | 0 | {covid-19,bio} |
- vienna-rna | 0 | {bio,covid-19} |
+ varscan | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(167 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
+Last-Update: Sun, 09 Aug 2026 01:42:05 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------
@@ -14,31 +14,31 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
mbpoll | 59 | {simulations} |
giac | 50 | {mathematics} |
imview | 38 | {viewing} |
- guiqwt | 37 | {numericalcomputation,viewing} |
+ guiqwt | 37 | {viewing,numericalcomputation} |
muparser | 37 | {mathematics-dev} |
setzer | 33 | {typesetting} |
teem | 27 | {imageanalysis} |
sardana | 26 | {dataacquisition} |
- persalys | 25 | {statistics,mathematics,engineering} |
+ persalys | 25 | {engineering,statistics,mathematics} |
libmatio | 24 | {mathematics-dev} |
arduino-mk | 23 | {robotics} |
- coinor-symphony | 23 | {logic,mathematics,numericalcomputation} |
- flann | 23 | {mathematics-dev,engineering-dev} |
+ coinor-symphony | 23 | {numericalcomputation,logic,mathematics} |
+ flann | 23 | {engineering-dev,mathematics-dev} |
pyzo | 22 | {numericalcomputation} |
eccodes | 21 | {meteorology,meteorology-dev} |
xygrib | 21 | {meteorology} |
sketch | 20 | {typesetting} |
apophenia | 19 | {statistics} |
feedgnuplot | 19 | {viewing} |
- lxi-tools | 19 | {dataacquisition,engineering} |
+ lxi-tools | 19 | {engineering,dataacquisition} |
palp | 19 | {mathematics} |
colpack | 18 | {numericalcomputation} |
- fftw | 18 | {mathematics-dev,meteorology-dev,physics-dev} |
+ fftw | 18 | {meteorology-dev,mathematics-dev,physics-dev} |
grads | 18 | {meteorology} |
ntl | 18 | {mathematics-dev} |
adolc | 17 | {numericalcomputation} |
eccodes | 17 | {meteorology-dev} |
- persalys | 15 | {mathematics,engineering,statistics} |
+ persalys | 15 | {statistics,mathematics,engineering} |
lttoolbox | 14 | {linguistics} |
pcl | 14 | {robotics-dev} |
picosat | 14 | {logic} |
@@ -46,33 +46,33 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
sat4j | 14 | {logic} |
vdt | 14 | {mathematics-dev} |
apertium | 13 | {linguistics} |
- debian-science | 13 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
- python-escript | 13 | {simulations,numericalcomputation,engineering} |
+ debian-science | 13 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
+ python-escript | 13 | {numericalcomputation,simulations,engineering} |
feff85exafs | 12 | {chemistry} |
flintqs | 12 | {mathematics} |
ipe-tools | 12 | {typesetting} |
libcvd | 12 | {imageanalysis} |
psurface | 12 | {numericalcomputation} |
- toulbar2 | 12 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 12 | {logic,physics,mathematics,numericalcomputation} |
dune-uggrid | 11 | {mathematics-dev} |
- debian-science | 10 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 10 | {machine-learning,economics,physics,nanoscale-physics} |
gts | 10 | {viewing-dev} |
libccp4 | 10 | {nanoscale-physics-dev} |
ros-vcstool | 10 | {robotics-dev} |
chemical-structures | 9 | {chemistry} |
- fftw | 9 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 9 | {meteorology-dev,mathematics-dev,physics-dev} |
alberta | 8 | {engineering-dev} |
cliquer | 8 | {mathematics} |
debian-science | 8 | {electrophysiology} |
- getdp | 8 | {mathematics,simulations,engineering} |
- jeuclid | 8 | {viewing,typesetting} |
+ getdp | 8 | {simulations,mathematics,engineering} |
+ jeuclid | 8 | {typesetting,viewing} |
libm4ri | 8 | {mathematics-dev} |
- libvigraimpex | 8 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 8 | {machine-learning,imageanalysis-dev} |
rubiks | 8 | {mathematics,geometry} |
auto-07p | 7 | {mathematics} |
bossa | 7 | {devices} |
cg3 | 7 | {linguistics} |
- debian-science | 7 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 7 | {neuroscience-cognitive,machine-learning} |
debian-science | 7 | {tools} |
iml | 7 | {mathematics-dev} |
libhomfly | 7 | {mathematics-dev} |
@@ -85,9 +85,9 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
hdf-eos5 | 6 | {meteorology-dev} |
hfst | 6 | {linguistics} |
libgctp | 6 | {meteorology-dev} |
- libitpp | 6 | {engineering-dev,mathematics-dev} |
+ libitpp | 6 | {mathematics-dev,engineering-dev} |
libmatheval | 6 | {mathematics} |
- matlab-support | 6 | {mathematics,numericalcomputation} |
+ matlab-support | 6 | {numericalcomputation,mathematics} |
metar | 6 | {meteorology} |
ncl | 6 | {meteorology} |
newmat | 6 | {mathematics-dev} |
@@ -96,7 +96,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
urdfdom-headers | 6 | {robotics-dev} |
clipper | 5 | {nanoscale-physics-dev} |
coda | 5 | {meteorology} |
- coinmp | 5 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 5 | {numericalcomputation,logic,mathematics-dev} |
gf2x | 5 | {mathematics-dev} |
libm4rie | 5 | {mathematics-dev} |
libmatheval | 5 | {mathematics-dev} |
@@ -108,16 +108,16 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
odc | 5 | {meteorology-dev} |
odc | 5 | {meteorology} |
openmesh | 5 | {mathematics-dev} |
- spfft | 5 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 5 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
toon | 5 | {numericalcomputation} |
veccore | 5 | {mathematics-dev} |
boolector | 4 | {logic} |
coda | 4 | {meteorology-dev} |
cylc-flow | 4 | {meteorology} |
- debian-science | 4 | {statistics,economics,nanoscale-physics,physics} |
+ debian-science | 4 | {economics,physics,statistics,nanoscale-physics} |
dxsamples | 4 | {nanoscale-physics} |
flextra | 4 | {meteorology} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
+ hpcc | 4 | {numericalcomputation,distributedcomputing} |
lrcalc | 4 | {mathematics} |
mpi4py-fft | 4 | {mathematics-dev} |
opencascade | 4 | {simulations} |
@@ -148,7 +148,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
ros-rosconsole | 3 | {robotics-dev} |
sac2mseed | 3 | {geography} |
ssm | 3 | {nanoscale-physics-dev} |
- trilinos | 3 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 3 | {physics-dev,engineering-dev,mathematics-dev} |
uctodata | 3 | {linguistics} |
apriltag | 2 | {robotics-dev} |
coinor-bonmin | 2 | {mathematics} |
@@ -164,7 +164,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
libcgns | 2 | {engineering} |
libcvd | 2 | {imageanalysis-dev} |
libdogleg | 2 | {mathematics-dev} |
- liblxi | 2 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 2 | {engineering-dev,dataacquisition-dev} |
libtnt | 2 | {mathematics-dev} |
meshsdfilter | 2 | {mathematics-dev} |
metkit | 2 | {meteorology-dev} |
@@ -190,7 +190,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
fpzip | 1 | {meteorology-dev} |
irstlm | 1 | {linguistics} |
libcgns | 1 | {engineering-dev} |
- libgtkdatabox | 1 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 1 | {viewing-dev,engineering-dev} |
liborigin2 | 1 | {viewing-dev} |
looptools | 1 | {highenergy-physics} |
looptools | 1 | {highenergy-physics-dev} |
@@ -227,7 +227,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
apertium-swe-dan | 0 | {linguistics} |
apertium-urd | 0 | {linguistics} |
apertium-urd-hin | 0 | {linguistics} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -240,7 +240,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
fastjet | 0 | {highenergy-physics-dev} |
frogdata | 0 | {linguistics} |
glpk-java | 0 | {mathematics-dev} |
- hepmc3 | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
ipe-tools | 0 | {typesetting} |
libfolia | 0 | {linguistics} |
libquantum | 0 | {numericalcomputation} |
@@ -248,7 +248,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
looptools | 0 | {highenergy-physics-dev} |
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
openctm | 0 | {physics-dev} |
@@ -266,7 +266,7 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
tachyon | 0 | {mathematics} |
@@ -281,8 +281,8 @@ Last-Update: Sat, 08 Aug 2026 13:42:04 +0000
visp-images | 0 | {robotics-dev} |
xppaut | 0 | {neuroscience-modeling} |
libelas | -1 | {robotics-dev} |
- python-escript | -1 | {numericalcomputation,engineering,simulations} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ python-escript | -1 | {simulations,engineering,numericalcomputation} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
tfdocgen | -1 | {linguistics} |
(312 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 08 Aug 2026 13:42:05 +0000
+Last-Update: Sun, 09 Aug 2026 01:42:06 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9d5c911a479e98689ca3e9ef1785cc1c6a44f27e
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9d5c911a479e98689ca3e9ef1785cc1c6a44f27e
You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260809/1f0d1cba/attachment-0001.htm>