[med-svn] [Git][med-team/mmseqs2][master] 7 commits: Packaging update (routine-update)
Andreas Tille (@tille)
gitlab at salsa.debian.org
Tue Aug 11 13:07:12 BST 2026
Andreas Tille pushed to branch master at Debian Med / mmseqs2
Commits:
fcc7571e by Andreas Tille at 2026-08-11T10:59:10+02:00
Packaging update (routine-update)
- - - - -
4ecd264d by Andreas Tille at 2026-08-11T10:59:16+02:00
Standards-Version: 4.7.4 (routine-update)
- - - - -
0e52befe by Andreas Tille at 2026-08-11T10:59:22+02:00
Changes made by cme
- - - - -
850f559d by Andreas Tille at 2026-08-11T10:59:28+02:00
Drop 'Rules-Requires-Root: no' from d/control (routine-update)
- - - - -
392c1dd7 by Andreas Tille at 2026-08-11T09:59:36+01:00
Rely on pre-initialized dpkg-architecture variables.
Changes-By: lintian-brush
- - - - -
8b941953 by Andreas Tille at 2026-08-11T09:59:36+01:00
Remove unused license definitions for LGPL.
Changes-By: lintian-brush
Fixes: lintian: source: unused-license-paragraph-in-dep5-copyright LGPL [debian/copyright:744]
See-also: https://lintian.debian.org/tags/unused-license-paragraph-in-dep5-copyright.html
- - - - -
d53fb1fa by Andreas Tille at 2026-08-11T14:06:44+02:00
Mark as team upload
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/copyright
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,15 @@
+mmseqs2 (18-8cc5c+ds-2) UNRELEASED; urgency=medium
+
+ * Team upload.
+ * Packaging update (routine-update)
+ * Standards-Version: 4.7.4 (routine-update)
+ * Remove Priority field (cme)
+ * Drop 'Rules-Requires-Root: no' from d/control (routine-update)
+ * Rely on pre-initialized dpkg-architecture variables.
+ * Remove unused license definitions for LGPL.
+
+ -- Andreas Tille <tille at debian.org> Tue, 11 Aug 2026 10:59:44 +0200
+
mmseqs2 (18-8cc5c+ds-1) unstable; urgency=medium
* Team upload.
=====================================
debian/control
=====================================
@@ -1,12 +1,11 @@
Source: mmseqs2
-Standards-Version: 4.7.2
+Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders:
Shayan Doust <hello at shayandoust.me>,
Section: science
-Priority: optional
Build-Depends:
- debhelper-compat (= 13),
+ debhelper-compat (= 14),
Build-Depends-Arch:
cmake,
architecture-is-64-bit,
@@ -20,7 +19,6 @@ Build-Depends-Arch:
Vcs-Browser: https://salsa.debian.org/med-team/mmseqs2
Vcs-Git: https://salsa.debian.org/med-team/mmseqs2.git
Homepage: https://github.com/soedinglab/MMseqs2
-Rules-Requires-Root: no
Package: mmseqs2
Architecture: any
=====================================
debian/copyright
=====================================
@@ -741,167 +741,6 @@ License: GPL-3
.
END OF TERMS AND CONDITIONS
-License: LGPL
- This version of the GNU Lesser General Public License incorporates
- the terms and conditions of version 3 of the GNU General Public
- License, supplemented by the additional permissions listed below.
- .
- 0. Additional Definitions.
- .
- As used herein, "this License" refers to version 3 of the GNU Lesser
- General Public License, and the "GNU GPL" refers to version 3 of the GNU
- General Public License.
- .
- "The Library" refers to a covered work governed by this License,
- other than an Application or a Combined Work as defined below.
- .
- An "Application" is any work that makes use of an interface provided
- by the Library, but which is not otherwise based on the Library.
- Defining a subclass of a class defined by the Library is deemed a mode
- of using an interface provided by the Library.
- .
- A "Combined Work" is a work produced by combining or linking an
- Application with the Library. The particular version of the Library
- with which the Combined Work was made is also called the "Linked
- Version".
- .
- The "Minimal Corresponding Source" for a Combined Work means the
- Corresponding Source for the Combined Work, excluding any source code
- for portions of the Combined Work that, considered in isolation, are
- based on the Application, and not on the Linked Version.
- .
- The "Corresponding Application Code" for a Combined Work means the
- object code and/or source code for the Application, including any data
- and utility programs needed for reproducing the Combined Work from the
- Application, but excluding the System Libraries of the Combined Work.
- .
- 1. Exception to Section 3 of the GNU GPL.
- .
- You may convey a covered work under sections 3 and 4 of this License
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License: public_domain
PUBLIC DOMAIN NOTICE
National Center for Biotechnology Information
=====================================
debian/rules
=====================================
@@ -9,7 +9,7 @@ export DEB_BUILD_MAINT_OPTIONS=hardening=+all
export DEB_CFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
export DEB_CXXFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
-DEB_HOST_MULTIARCH ?= $(shell dpkg-architecture -qDEB_HOST_MULTIARCH)
+include /usr/share/dpkg/architecture.mk
binprefix=$(CURDIR)/debian/$(DEB_SOURCE)/usr/bin
libexecdir=$(prefix)/lib/$(DEB_SOURCE)
View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/-/compare/e71de8b270d0cff3683fdfa88b734efab9d73357...d53fb1fa76eb1e16c56a721db1dab6d6f8e86570
--
View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/-/compare/e71de8b270d0cff3683fdfa88b734efab9d73357...d53fb1fa76eb1e16c56a721db1dab6d6f8e86570
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