[med-svn] [Git][med-team/pbdagcon][master] 7 commits: Ignore broken test-uscan CI test

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pbdagcon


Commits:
a634f9b1 by Andreas Tille at 2026-08-12T15:31:49+02:00
Ignore broken test-uscan CI test

- - - - -
8f87bb70 by Andreas Tille at 2026-08-12T15:35:01+02:00
d/watch:

   - Version=5
   - Mark as untrackable

- - - - -
eff6d876 by Andreas Tille at 2026-08-12T15:35:14+02:00
Standards-Version: 4.7.4 (routine-update)

- - - - -
5b7e4ec4 by Andreas Tille at 2026-08-12T15:35:23+02:00
Changes made by cme

- - - - -
a1fb0a45 by Andreas Tille at 2026-08-12T14:35:26+01:00
Set upstream metadata fields: Bug-Database.

Changes-By: lintian-brush

- - - - -
94d73c60 by Andreas Tille at 2026-08-12T15:35:27+02:00
debputy lint --auto-fix (routine-update)

- - - - -
004b3159 by Andreas Tille at 2026-08-12T15:36:43+02:00
routine-update: Ready to upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/control
- debian/salsa-ci.yml
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,10 +1,18 @@
-pbdagcon (0.3+git20180411.c14c422+dfsg-11) UNRELEASED; urgency=medium
+pbdagcon (0.3+git20180411.c14c422+dfsg-11) unstable; urgency=medium
 
   * Rebuild against gcc-16 - enabled pbseqlib
   * Fix autopkgtest
   * Force -std=c++17 to make sure build time test is passing reproducibly
-
- -- Andreas Tille <tille at debian.org>  Wed, 12 Aug 2026 14:31:17 +0200
+  * Ignore broken test-uscan CI test
+  * d/watch:
+     - Version=5
+     - Mark as untrackable
+  * Standards-Version: 4.7.4 (routine-update)
+  * Reflow Uploaders field (cme)
+  * Set upstream metadata fields: Bug-Database.
+  * debputy lint --auto-fix (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Wed, 12 Aug 2026 15:35:29 +0200
 
 pbdagcon (0.3+git20180411.c14c422+dfsg-10) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -1,30 +1,34 @@
 Source: pbdagcon
+Standards-Version: 4.7.4
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>
+Uploaders:
+ Andreas Tille <tille at debian.org>,
 Section: science
-Build-Depends: debhelper-compat (= 13),
-               python3:any,
-               zlib1g-dev,
-               libhdf5-dev,
-               libboost-dev,
-               libtclap-dev,
-               libpbseq-dev (>= 5.3.5+dfsg-12~),
-               libpbbam-dev,
-               libpbdata-dev (>= 5.3.5+dfsg-12~),
-               libpbcopper-dev,
-               libpbihdf-dev (>= 5.3.5+dfsg-12~),
-               googletest <!nocheck>
-Standards-Version: 4.7.3
+Build-Depends:
+ debhelper-compat (= 14),
+ python3:any,
+ zlib1g-dev,
+ libhdf5-dev,
+ libboost-dev,
+ libtclap-dev,
+ libpbseq-dev (>= 5.3.5+dfsg-12~),
+ libpbbam-dev,
+ libpbdata-dev (>= 5.3.5+dfsg-12~),
+ libpbcopper-dev,
+ libpbihdf-dev (>= 5.3.5+dfsg-12~),
+ googletest <!nocheck>,
 Vcs-Browser: https://salsa.debian.org/med-team/pbdagcon
 Vcs-Git: https://salsa.debian.org/med-team/pbdagcon.git
 Homepage: https://github.com/PacificBiosciences/pbdagcon
 
 Package: pbdagcon
 Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         libpbseq (>= 5.3.5+dfsg-4~)
-Suggests: blasr
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
+ libpbseq,
+Suggests:
+ blasr,
 Description: sequence consensus using directed acyclic graphs
  pbdagcon is a tool that implements DAGCon (Directed Acyclic Graph Consensus)
  which is a sequence consensus algorithm based on using directed acyclic


=====================================
debian/salsa-ci.yml
=====================================
@@ -1,8 +1,11 @@
 ---
 include:
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml
 
 variables:
   SALSA_CI_DISABLE_BUILD_PACKAGE_I386: "true"
   SALSA_CI_DISABLE_REPROTEST: 1
+
+# Ignore broken test-uscan CI test
+test-uscan:
+  allow_failure: true


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,4 @@
+Bug-Database: https://github.com/PacificBiosciences/pbdagcon/issues
 Registry:
  - Name: OMICtools
    Entry: OMICS_18567


=====================================
debian/watch
=====================================
@@ -1,4 +1,10 @@
-version=4
+Version: 5
+Untrackable: upstream vanished.
 
-opts="mode=git,gitmode=full,pretty=0.3+git%cd.%h,repacksuffix=+dfsg,dversionmangle=auto,repack,compression=xz" \
-    https://github.com/PacificBiosciences/pbdagcon.git HEAD
+Source: https://github.com/PacificBiosciences/pbdagcon.git
+Matching-Pattern: HEAD
+Dversion-Mangle: auto
+Git-Mode: full
+Mode: git
+Git-Pretty: 0.3+git%cd.%h
+Repack-Suffix: +dfsg



View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/09a2e53c6e174b83d8d2d85af2c5321efa387346...004b315949ced6a1fccf889ce4eeb5df48d234c5

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/09a2e53c6e174b83d8d2d85af2c5321efa387346...004b315949ced6a1fccf889ce4eeb5df48d234c5
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