[med-svn] [Git][med-team/pyensembl][master] 3 commits: New upstream version 2.10.4

[Steffen Möller (@moeller)]

Steffen Möller pushed to branch master at Debian Med / pyensembl


Commits:
60ab30e5 by Steffen Moeller at 2026-08-29T02:04:54+02:00
New upstream version 2.10.4
- - - - -
fda6037e by Steffen Moeller at 2026-08-29T02:04:55+02:00
Update upstream source from tag 'upstream/2.10.4'

Update to upstream version '2.10.4'
with Debian dir 7871e7f3991dd268b1f08ce302a610441cfed2d5
- - - - -
a769bbbf by Steffen Moeller at 2026-08-29T02:05:51+02:00
Pointing to build failure

- - - - -


35 changed files:

- .github/workflows/tests.yml
- README.md
- debian/changelog
- pyensembl/__init__.py
- pyensembl/common.py
- pyensembl/database.py
- pyensembl/ensembl_release.py
- pyensembl/ensembl_url_templates.py
- pyensembl/ensembl_versions.py
- pyensembl/exon.py
- pyensembl/fasta.py
- pyensembl/gene.py
- pyensembl/genome.py
- pyensembl/locus.py
- pyensembl/locus_with_genome.py
- + pyensembl/protein.py
- pyensembl/sequence_data.py
- pyensembl/shell.py
- pyensembl/species.py
- pyensembl/transcript.py
- pyensembl/version.py
- pyproject.toml
- test.sh
- + tests/test_biotype_filter.py
- + tests/test_database_cache_dir.py
- + tests/test_ensembl_genomes_species.py
- + tests/test_extended_protein_coding.py
- + tests/test_fasta_versions.py
- + tests/test_gencode_biotype_aliases.py
- tests/test_locus.py
- + tests/test_merged_gene_intervals.py
- + tests/test_nearest_feature.py
- tests/test_shell.py
- + tests/test_versioned_protein_fasta.py
- + tests/test_versions.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pyensembl/-/compare/b771060719a83a09ed2eff82d47b6e8a4f214f6a...a769bbbf6ee5ec82362d1652981c8ea722982dc8

-- 
View it on GitLab: https://salsa.debian.org/med-team/pyensembl/-/compare/b771060719a83a09ed2eff82d47b6e8a4f214f6a...a769bbbf6ee5ec82362d1652981c8ea722982dc8
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